| Protein: | CE05380 |
| Organism: | Caenorhabditis elegans |
| Length: | 418 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05380.
| Description | E-value | Query Range |
Subject Range |
|
|
325.0 | [0..1] | [418..1] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MSETSSDKNC CETLEWIRER VHNKKHFTAR GIGQIVDVSG MDAELVVKVL AGALFAILAF 60
61 SDQAHFFANA LLVAIPALLI FVFPIEKPTD ESLFVYFSLF GAVTCLDRSL EKI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [114-289] |
1 11 21 31 41 51
| | | | | |
1 PCYYVIKLAL FALLYLPPYV MHQKINEFIR EQLKKQKSNE NVSEMSQRSA PRTAASTRTA 60
61 ISAPPPPRPP PQEPPKPVEQ AAPPPPPAPM PVPVEKAPEP VPAPVEQIAP PPAPVQDPAP 120
121 APVEPSDPAP PSKLPSPSKS CTDLAGGSQR FKTGPHPMQS SSFHNLKSEF DGFNSA
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 2grxC |
| Description: | No description for 2grxC was found. |
|
Region A: Residues: [290-418] |
1 11 21 31 41 51
| | | | | |
1 ISPGHNLNDV LFRPMDKIVF NAPFDFENLT YHMRVSNNSR HRIAYAIKGN SVPRVMAYPA 60
61 FGILELGEGR IIAVSVQKFD WNDFEYNKDR IAFDYVLLPD SNKEKAFSMS MFQHSDSKRR 120
121 KNIKIEYNP
|
| Detection Method: | |
| Confidence: | 41.221849 |
| Match: | 1grwA |
| Description: | Major sperm protein, MSP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.653234420802729 | bayes_pls_golite062009 |
| protein binding | 0.170808849690486 | bayes_pls_golite062009 |
