YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE05376

General Information:
Name(s) found: CE05376 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00007976 status:Partially_confirmed UniProt:Q93343 protein_id:CAB02274.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 674 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: proton transport [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]
    hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESAEVISN ADASYGTDTD TLPDTELPSL NVLEVDEPKE EIKKNEMSRI DIIREAADNV  60
   61 QSCRVCYDEY HSSSNQARVL QCGHTFCTRC VVGCSSTMNN TSEEFGIKCP ECRKINEQVP 120
  121 ATVPINFQLM QILTTLSLVK VLQTPPQDQE IPKYENFERL GTEIPIADLV NLTMGELYEH 180
  181 LKAVFNAIRL RGKRDKTSIR PSVVHRYDSE FKKIDEVERS MNRVLHNVIK LQSGETLPRP 240
  241 APTITIPYWQ LDREYRRSLQ DNDWMREMVV FRPPTSGPVP VRPLVAPPQP PAQPPVQDVD 300
  301 TVLEREQAAR AEADPRRHLN AVREAHLRRE RESAQEREAA VRNEQLMRQL LDRNENMQNV 360
  361 HIDRNDPFSL FRHLQRQEER DLEMHLRFRR TLDQDRDRES MRRVADGLPP ILDHDDVDVE 420
  421 EDDDESVASD NSSFVDEPVE RPPPPRMTLG EAVTIYRMIE VFSPRHFRHG PDSFSLPHNH 480
  481 ANLNSLYREL LPPNSPITIT DTMSDSQLAD LRRYSQANNV DCDRLLRVLR HHSIKFAPTI 540
  541 VESPRLTERR RRRQRPVPAD DYNAHLSVIR KRAKEALRGN RPEQPTNGEE SNLTIRLIVN 600
  601 LANSMGVREK LDDVICPQHR AQEEEKEMFV PRTNGSTRQE MLFCNVCRCE VPMGSKAVHS 660
  661 QGKRHIAAMA KFVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 9.522879 RAG1 DIMERIZATION DOMAIN
    2 View Details [232..355] deduced N/A No confident structure predictions are available.
    3 View Details [356..520] PSI-BLAST 28.522879 No description for 2iwgB was found.
    4 View Details [521..674] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle