| Protein: | CE05376 |
| Organism: | Caenorhabditis elegans |
| Length: | 674 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE05376.
| Description | E-value | Query Range |
Subject Range |
|
|
511.0 | [0..1] | [674..1] |
|
Region A: Residues: [1-231] |
1 11 21 31 41 51
| | | | | |
1 MSESAEVISN ADASYGTDTD TLPDTELPSL NVLEVDEPKE EIKKNEMSRI DIIREAADNV 60
61 QSCRVCYDEY HSSSNQARVL QCGHTFCTRC VVGCSSTMNN TSEEFGIKCP ECRKINEQVP 120
121 ATVPINFQLM QILTTLSLVK VLQTPPQDQE IPKYENFERL GTEIPIADLV NLTMGELYEH 180
181 LKAVFNAIRL RGKRDKTSIR PSVVHRYDSE FKKIDEVERS MNRVLHNVIK L
|
| Detection Method: |  |
| Confidence: | 9.522879 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [232-355] |
1 11 21 31 41 51
| | | | | |
1 QSGETLPRPA PTITIPYWQL DREYRRSLQD NDWMREMVVF RPPTSGPVPV RPLVAPPQPP 60
61 AQPPVQDVDT VLEREQAARA EADPRRHLNA VREAHLRRER ESAQEREAAV RNEQLMRQLL 120
121 DRNE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [356-520] |
1 11 21 31 41 51
| | | | | |
1 NMQNVHIDRN DPFSLFRHLQ RQEERDLEMH LRFRRTLDQD RDRESMRRVA DGLPPILDHD 60
61 DVDVEEDDDE SVASDNSSFV DEPVERPPPP RMTLGEAVTI YRMIEVFSPR HFRHGPDSFS 120
121 LPHNHANLNS LYRELLPPNS PITITDTMSD SQLADLRRYS QANNV
|
| Detection Method: | |
| Confidence: | 28.522879 |
| Match: | 2iwgB |
| Description: | No description for 2iwgB was found. |
|
Region A: Residues: [521-674] |
1 11 21 31 41 51
| | | | | |
1 DCDRLLRVLR HHSIKFAPTI VESPRLTERR RRRQRPVPAD DYNAHLSVIR KRAKEALRGN 60
61 RPEQPTNGEE SNLTIRLIVN LANSMGVREK LDDVICPQHR AQEEEKEMFV PRTNGSTRQE 120
121 MLFCNVCRCE VPMGSKAVHS QGKRHIAAMA KFVF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
