Protein Overview: msh-4

General Information:
Name(s) found:	msh-4 / CE04858 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00003420 locus:msh-4 status:Partially_confirmed UniProt:Q22103 protein_id:CCD69177.1 [WormBase] pir\|\|T16784 hypothetical protein T02G5.6 - Caenorhabditis elegans [NCBI NR] gi\|17535283\|ref\|NP_495458.1\| MSH (MutS Homolog) family member (msh-4) [Caenorhabditis elegans] [NCBI NR] gi\|1086777\|gb\|AAA82400.1\| Msh (muts homolog) family protein 4 [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE04858 WBGene00003420 locus:msh-4 status:Predicted TR:Q22103 protein_id:AAA82400.1 [wormpep150.fasta] 04858 WBGene00003420 locus:msh-4 status:Predicted TR:Q22103 protein_id:AAA82400.1 [wormpep130-phg-ecoli-orf-rand.fasta] MutS Homolog (msh-4) [Caenorhabditis elegans]gi\|1086777\|gb\|AAA82400.1\| Msh (muts homolog) family protein 4 [Caenorhabditis elegans]gi\|7506963\|pir\|\|T16784 hypothetical protein T02G5.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas] locus:msh-4 status:Partially_confirmed TR:Q22103 protein_id:AAA82400.1 [wormpep115.fasta.reversed] CE04858 locus:msh-4 status:Predicted [wormpep80.hongbin] CE04858 WBGene00003420 locus:msh-4 status:Predicted UniProt:Q22103_CAEEL protein_id:AAA82400.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE04858 WBGene00003420 locus:msh-4 status:Predicted UniProt:Q22103_CAEEL protein_id:AAA82400.1\| [wormORF-contam.fasta] MSH (MutS Homolog) family member (msh-4) [Caenorhabditis elegans] [nr-271106-contam.fasta] Msh (muts homolog) family protein 4 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE04858 WBGene00003420 locus:msh-4 status:Predicted UniProt:Q22103 protein_id:AAA82400.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE04858 WBGene00003420 locus:msh-4 status:Partially_confirmed UniProt:Q22103 protein_id:CCD69177.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
Organism:	Caenorhabditis elegans
Length:	107 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	mismatch repair [IEA]
Molecular Function:	ATP binding [IEA] mismatched DNA binding [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MGHNDELIRN KSAFASEMSD AAAIVQYADK NSLVVLDELA RSTSTEEGIA ITYAICEKVL 60 61 KLHSYTFLAT HFLDIAALAN YSNAIDNYHF LPQIDDNSTK KHKLLRG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..107]	PSI-BLAST	36.30103	Crystal structure of E. coli DNA mismatch repair enzyme MutS, E38Q mutant, in complex with a G.T mismatch

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.94

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle