YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE04781

General Information:
Name(s) found: CE04781 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00019828 status:Partially_confirmed UniProt:Q21641 protein_id:CCD64656.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 639 amino acids

    Gene Ontology:
    Cellular Component: microtubule [IEALink to PubMed article]
    Biological Process: microtubule cytoskeleton organization [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVEEQVVEM LSNLDFESLE FEDVQCHICF QVNHEPVTFL TCKHSICAGC AGRWLSSCSV  60
   61 CPMCRTRVRE IHLNDDLKKK SLEFLKLHPE QELPEDIKWE QCCHETVFWS LQQRKRANES 120
  121 DAVFYGSQPV VPEHLSAEES NDFIETKRLE NIRIRLDVLT KQVAEQTPRV QQYYNVEKFN 180
  181 QLFYQNEISY RDEDQEWRMV HGRGLIRIPR KFANSADQAH YQKMSEVYRF RHTSGQVQFR 240
  241 ITRTEYDDPI EIVRMARLAV KEANMRAARM QGQTTQQLMQ RVKDLKYWSG EIDRELADVK 300
  301 EEHDDLLRCY RRLQLCLDIT GRSSRCNESC LAVRRKKVQV GDHTSDRVDM ELHKEKELMT 360
  361 DTMKQMKEIG ERVERQLEVN QSARKNLLRD LTLKQEAISL DHKSVAIGAD GTKTVIRTPD 420
  421 GDRLDFREGA PLQRMSEYSE WIENTGNNLN YAARARVHSR KIGQKLCQSI REMAHQLRTE 480
  481 AIAVEALLKD SVRNWQEWKD NLHSQVNGKD KEIKNADGAI EEISFSLRQK SGPLQVALSR 540
  541 QNQRGLRPGI ELCNDKAQHA LHQELMMLKG TFLSLENQLD KAKESRKKLD NDRDKLQRKL 600
  601 DICDHNLTID NEILRQIRTS YPHEIQLSGF LLSETKEHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..60] PSI-BLAST 15.39794 RAG1 DIMERIZATION DOMAIN
    2 View Details [61..454] PSI-BLAST 25.522879 Heavy meromyosin subfragment
    3 View Details [455..639] PSI-BLAST 8.522879 Tropomyosin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.979273765206617 bayes_pls_golite062009
  • protein binding
    		•  0.38968855779244 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle