| Protein: | CE04781 |
| Organism: | Caenorhabditis elegans |
| Length: | 639 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04781.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..103] | [637..1796] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MTVEEQVVEM LSNLDFESLE FEDVQCHICF QVNHEPVTFL TCKHSICAGC AGRWLSSCSV 60
61
|
| Detection Method: |  |
| Confidence: | 15.39794 |
| Match: | 1rmdA |
| Description: | RAG1 DIMERIZATION DOMAIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.979273765206617 | bayes_pls_golite062009 |
| protein binding | 0.38968855779244 | bayes_pls_golite062009 |
|
Region A: Residues: [61-454] |
1 11 21 31 41 51
| | | | | |
1 CPMCRTRVRE IHLNDDLKKK SLEFLKLHPE QELPEDIKWE QCCHETVFWS LQQRKRANES 60
61 DAVFYGSQPV VPEHLSAEES NDFIETKRLE NIRIRLDVLT KQVAEQTPRV QQYYNVEKFN 120
121 QLFYQNEISY RDEDQEWRMV HGRGLIRIPR KFANSADQAH YQKMSEVYRF RHTSGQVQFR 180
181 ITRTEYDDPI EIVRMARLAV KEANMRAARM QGQTTQQLMQ RVKDLKYWSG EIDRELADVK 240
241 EEHDDLLRCY RRLQLCLDIT GRSSRCNESC LAVRRKKVQV GDHTSDRVDM ELHKEKELMT 300
301 DTMKQMKEIG ERVERQLEVN QSARKNLLRD LTLKQEAISL DHKSVAIGAD GTKTVIRTPD 360
361 GDRLDFREGA PLQRMSEYSE WIENTGNNLN YAAR
|
| Detection Method: | |
| Confidence: | 25.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [455-639] |
1 11 21 31 41 51
| | | | | |
1 ARVHSRKIGQ KLCQSIREMA HQLRTEAIAV EALLKDSVRN WQEWKDNLHS QVNGKDKEIK 60
61 NADGAIEEIS FSLRQKSGPL QVALSRQNQR GLRPGIELCN DKAQHALHQE LMMLKGTFLS 120
121 LENQLDKAKE SRKKLDNDRD KLQRKLDICD HNLTIDNEIL RQIRTSYPHE IQLSGFLLSE 180
181 TKEHR
|
| Detection Method: | |
| Confidence: | 8.522879 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
