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Protein Overview: CE04161

General Information:
Name(s) found: CE04161 [WormBase]
Description(s) found:
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  • WBGene00016384 locus:cdgs-1 Probable phosphatidate cytidylyltransferase status:Confirmed UniProt:P53439 protein_id:CCD66581.1 [WormBase]
  • pir||T34155 hypothetical protein C33H5.18 - Caenorhabditis elegans [NCBI NR]
  • gi|17539014|ref|NP_501297.1| hypothetical protein C33H5.18 [Caenorhabditis elegans] [NCBI NR]
  • gi|1705739|sp|P53439.1|CDSA_CAEEL RecName: Full=Probable phosphatidate cytidylyltransferase; AltName: Full=CDP-diglyceride pyrophosphorylase; AltName: Full=CDP-diglyceride synthetase; AltName: Full=CDP-diacylglycerol synthase; AltName: Full=CDP-DG synthet [NCBI NR]
  • gi|1086597|gb|AAA82275.1| Hypothetical protein C33H5.18a [Caenorhabditis elegans] [NCBI NR]
  • Probable phosphatidate cytidylyltransferase OS=Caenorhabditis elegans GN=C33H5.18 PE=3 SV=1 [Swiss-Prot]
  • Putative phosphatidate cytidylyltransferase - Caenorhabditis elegans [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04161 WBGene00016384 CDP-diacylglycerol synthase status:Partially_confirmed SW:P53439 protein_id:AAA82275.1 [wormpep150.fasta]
  • 04161 WBGene00016384 CDP-diacylglycerol synthase status:Partially_confirmed SW:P53439 protein_id:AAA82275.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • phosphatidate cytidylyltransferase (52.4 kD) (4I576Co) [Caenorhabditis elegans]gi|1086597|gb|AAA82275.1| Hypothetical protein C33H5.18a [Caenorhabditis elegans]gi|7496957|pir||T34155 hypothetical protein C33H5.18 - Caenorhabditis elegansgi|1705739|sp|P [nrdb_11152004_Chlamydomonas]
  • CDP-diacylglycerol synthase status:Partially_confirmed SW:P53439 protein_id:AAA82275.1 [wormpep115.fasta.reversed]
  • CE04161 CDP-diacylglycerol synthase status:Partially_confirmed SW:P53439 protein_id:AAA82275.1 [wormpep80.hongbin]
  • CE04161 WBGene00016384 CDP-diacylglycerol synthase status:Partially_confirmed UniProt:P53439 protein_id:AAA82275.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04161 WBGene00016384 CDP-diacylglycerol synthase status:Partially_confirmed UniProt:P53439 protein_id:AAA82275.1| [wormORF-contam.fasta]
  • Putative phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) (CDP-diglyceride pyrophosphorylase) (CDP-diacylglycerol synthase) (CDP-DAG synthase) (CDP-DG synthetase) [nr-271106-contam.fasta]
  • C33H5.18a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C33H5.18a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04161 WBGene00016384 CDP-diacylglycerol synthase status:Confirmed UniProt:P53439 protein_id:AAA82275.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04161 WBGene00016384 CDP-diacylglycerol synthase status:Confirmed UniProt:P53439 protein_id:CCD66581.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04161 WBGene00016384 locus:cdgs-1 status:Confirmed UniProt:P53439 protein_id:CCD66581.1 Probable phosphatidate cytidylyltransferase [wormpep246-ecoli-contam.fasta]
  • CE04161 WBGene00016384 locus:cdgs-1 status:Confirmed UniProt:P53439 protein_id:CCD66581.1 Phosphatidate cytidylyltransferase [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Isoform of P53439, Isoform a of Phosphatidate cytidylyltransferase OS=Caenorhabditis elegans GN=cdgs-1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    phospholipid biosynthetic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: phosphatidate cytidylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQPPAENA DVRQRRAPES PVTERLRAPA RDDARPTSDE SDMEGILQDE DRLERLTQAI  60
   61 PQDKGSLGVF ADSMLEALPP RWRNWVVRGL FSIIMISTFT FIVTRGATWL MFLVFLIQFK 120
  121 CFQEIISIGL AVYRLYDFPW FRALSWYFLL TSNYFFFGES LIDYWGIVLK KDNFLHFLVA 180
  181 YHRLVSFALY CIGFVSFVLS LRKGYYMRQF SLFAWTHLTL LLIVSQSFFI IQNIFQGLIW 240
  241 FLAPVAMIIC CDIMSYMFGF FWGKTPLIKL SPKKTWEGFI GGAFSTVVFG ILLSLALYNR 300
  301 PFFVCPVQHY QTDSSNCTIP LAFQLQDYPV PRPFSFVYKI LRKEPIIQLC PFVFHSIALS 360
  361 LFASILGPFG GFFASGFKRA FKIKDFGDVI PGHGGLMDRF DCQLLMGTFV MVYIHSFIRV 420
  421 PDASKLLKQI MTLEPQDQLN IFNLLQSELS KTGLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..455] PSI-BLAST 14.69897 The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  3.25378130357911 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  3.21414935217652 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.96907885979651 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.88135446829074 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.76810341517807 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.49439394266093 bayes_pls_golite062009
  • transporter activity
    		•  1.48595016516156 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.4714803926748 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.3699174299697 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  0.930003698282159 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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