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Protein Overview: CE04161

General Information:
Name(s) found: CE04161 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00016384 locus:cdgs-1 Probable phosphatidate cytidylyltransferase status:Confirmed UniProt:P53439 protein_id:CCD66581.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 455 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    phospholipid biosynthetic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: phosphatidate cytidylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQPPAENA DVRQRRAPES PVTERLRAPA RDDARPTSDE SDMEGILQDE DRLERLTQAI  60
   61 PQDKGSLGVF ADSMLEALPP RWRNWVVRGL FSIIMISTFT FIVTRGATWL MFLVFLIQFK 120
  121 CFQEIISIGL AVYRLYDFPW FRALSWYFLL TSNYFFFGES LIDYWGIVLK KDNFLHFLVA 180
  181 YHRLVSFALY CIGFVSFVLS LRKGYYMRQF SLFAWTHLTL LLIVSQSFFI IQNIFQGLIW 240
  241 FLAPVAMIIC CDIMSYMFGF FWGKTPLIKL SPKKTWEGFI GGAFSTVVFG ILLSLALYNR 300
  301 PFFVCPVQHY QTDSSNCTIP LAFQLQDYPV PRPFSFVYKI LRKEPIIQLC PFVFHSIALS 360
  361 LFASILGPFG GFFASGFKRA FKIKDFGDVI PGHGGLMDRF DCQLLMGTFV MVYIHSFIRV 420
  421 PDASKLLKQI MTLEPQDQLN IFNLLQSELS KTGLI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..455] PSI-BLAST 14.69897 The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  3.25378130357911 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  3.21414935217652 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.96907885979651 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.88135446829074 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.76810341517807 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.49439394266093 bayes_pls_golite062009
  • transporter activity
    		•  1.48595016516156 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.4714803926748 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.3699174299697 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  0.930003698282159 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle