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Protein Overview: elpc-4

General Information:
Name(s) found: elpc-4 / CE04092 [WormBase]
Description(s) found:
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  • WBGene00016128 locus:elpc-4 Putative elongator complex protein 4 status:Confirmed UniProt:Q18195 protein_id:CCD65198.1 [WormBase]
  • pir||T34124 hypothetical protein C26B2.6 - Caenorhabditis elegans [NCBI NR]
  • gi|74962748|sp|Q18195.1|ELP4_CAEEL RecName: Full=Putative elongator complex protein 4; Short=ELP4 [NCBI NR]
  • gi|17538796|ref|NP_501343.1| ELongator complex Protein Component family member (elpc-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|1118113|gb|AAC24262.1| Hypothetical protein C26B2.6 [Caenorhabditis elegans] [NCBI NR]
  • Putative elongator complex protein 4 OS=Caenorhabditis elegans GN=elpc-4 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE04092 WBGene00016128 status:Confirmed TR:Q18195 protein_id:AAC24262.1 [wormpep150.fasta]
  • 04092 WBGene00016128 status:Confirmed TR:Q18195 protein_id:AAC24262.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • elongation protein 4 homolog like (37.6 kD) (4I785) [Caenorhabditis elegans]gi|1118113|gb|AAC24262.1| Hypothetical protein C26B2.6 [Caenorhabditis elegans]gi|7496530|pir||T34124 hypothetical protein C26B2.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q18195 protein_id:AAC24262.1 [wormpep115.fasta.reversed]
  • CE04092 status:Predicted TR:Q18195 protein_id:AAC24262.1 [wormpep80.hongbin]
  • CE04092 WBGene00016128 locus:elpc-4 status:Confirmed UniProt:Q18195 protein_id:AAC24262.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04092 WBGene00016128 locus:elpc-4 status:Confirmed UniProt:Q18195 protein_id:AAC24262.1| [wormORF-contam.fasta]
  • Hypothetical protein C26B2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C26B2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04092 WBGene00016128 status:Confirmed SW:Q18195 protein_id:AAC24262.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04092 WBGene00016128 locus:elpc-4 status:Confirmed UniProt:Q18195 protein_id:CCD65198.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE04092 WBGene00016128 locus:elpc-4 status:Confirmed UniProt:Q18195 protein_id:CCD65198.1 Putative elongator complex protein 4 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: Elongator holoenzyme complex [IEALink to PubMed article]
    Biological Process: regulation of transcription from RNA polymerase II promoter [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVGDSVQI AGCSTKKRLL ETSSGCDSFD TLIGGALVNS SIVLIDEYRS RCYGSYLIRS  60
   61 FLAEGLHHGH RCFIADPTED PKEINLIPSR RTSTDMQNQE IPNSLPAENE NSMKIAWRYG 120
  121 NVKQVSSSLG PLSNENQYDF TKHVENPNVD VYAEKVFTLK GIYETLCQIV KENEAHTKSG 180
  181 GRGGPKKNLL RVVLKNIDME ICEDYKFLGR FLCCLRSLAR SSYMIVYITA NSFRVPKPTW 240
  241 RILESAADTH IQLMPFDENE KKMFKHLGTA HGYFHLKSLP RLMSVGTHTP PILDLIFEAS 300
  301 SRKGFQIRVM HLPPAFDEPA PGHQNTPSCQ NIDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 35.69897 No description for 2dr3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle