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View Structure Prediction Details

Protein: elpc-4
Organism: Caenorhabditis elegans
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for elpc-4.

Description E-value Query
Range
Subject
Range
gi|73982346 - gi|73982346|ref|XP_540560.2| PREDICTED: similar to elongation protein 4 homolog [Canis familiaris]
335.0 [0..8] [331..51]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVGDSVQI AGCSTKKRLL ETSSGCDSFD TLIGGALVNS SIVLIDEYRS RCYGSYLIRS  60
   61 FLAEGLHHGH RCFIADPTED PKEINLIPSR RTSTDMQNQE IPNSLPAENE NSMKIAWRYG 120
  121 NVKQVSSSLG PLSNENQYDF TKHVENPNVD VYAEKVFTLK GIYETLCQIV KENEAHTKSG 180
  181 GRGGPKKNLL RVVLKNIDME ICEDYKFLGR FLCCLRSLAR SSYMIVYITA NSFRVPKPTW 240
  241 RILESAADTH IQLMPFDENE KKMFKHLGTA HGYFHLKSLP RLMSVGTHTP PILDLIFEAS 300
  301 SRKGFQIRVM HLPPAFDEPA PGHQNTPSCQ NIDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.69897
Match: 2dr3A
Description: No description for 2dr3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle