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Protein Overview: CE04045

General Information:
Name(s) found: CE04045 [WormBase]
Description(s) found:
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  • WBGene00015957 locus:del-9 status:Partially_confirmed UniProt:Q18077 protein_id:CCD65078.1 [WormBase]
  • pir||T15552 hypothetical protein C18B2.6 - Caenorhabditis elegans [NCBI NR]
  • gi|17550546|ref|NP_508622.1| hypothetical protein C18B2.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|13775355|gb|AAK39175.1| Hypothetical protein C18B2.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE04045 WBGene00015957 status:Partially_confirmed TR:Q18077 protein_id:AAK39175.1 [wormpep150.fasta]
  • 04045 WBGene00015957 status:Partially_confirmed TR:Q18077 protein_id:AAK39175.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • amiloride-sensitive cation channel 3 (XE232) [Caenorhabditis elegans]gi|13775355|gb|AAK39175.1| Hypothetical protein C18B2.6 [Caenorhabditis elegans]gi|7496262|pir||T15552 hypothetical protein C18B2.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q18077 protein_id:AAK39175.1 [wormpep115.fasta.reversed]
  • CE04045 status:Predicted TR:Q18077 protein_id:AAK39175.1 [wormpep80.hongbin]
  • CE04045 WBGene00015957 status:Partially_confirmed UniProt:Q18077_CAEEL protein_id:AAK39175.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE04045 WBGene00015957 status:Partially_confirmed UniProt:Q18077_CAEEL protein_id:AAK39175.1| [wormORF-contam.fasta]
  • C18B2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C18B2.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE04045 WBGene00015957 status:Partially_confirmed UniProt:Q18077 protein_id:AAK39175.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE04045 WBGene00015957 locus:del-9 status:Partially_confirmed UniProt:Q18077 protein_id:CCD65078.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • DEgenerin Like OS=Caenorhabditis elegans GN=del-9 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 599 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    ion transport [IEALink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    sodium channel activity [IEALink to PubMed article]
    amiloride-sensitive sodium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHQRRSTIR RTRFDEASCV MYMNGNFPET TVVRSHSLTQ SQSLSDSAES AIRRLKKENH  60
   61 CLKKTLSRRW SGRSRASTRS HDPTDASSLS DSSDDNDDSL YLLRETSTLH GLRDVMLSSS 120
  121 GRLRMVWVLI VILALFMTFQ GCYQIMDEYS MRRIVVSYFI QEAQSIWVPD VVVCPYNRLN 180
  181 RSFIEANNVS FELAQFLELS FPSMDLPFEN IQQQQEEIIS KIDTLDFQIE ILLEQNNMTY 240
  241 AQFLRKASLN CEAFFEDSRR CANTTEIMTS AGKCFRMAGI KQEIAGFGNG DRYVIDLPEE 300
  301 YYNPGINQMI NSGVIIKLAE RGQGIDNDLT FLPAGVHAIM PLLGTQFEFM NDPPRYECEE 360
  361 DPHGNYSRVH CFEDCLTLDA QQTCQCSPAA AQNPAYPDKL CTATQLYHCF FTKLFPEDSN 420
  421 LSKAIVDACK KECKAPCHAW NYNKQVSYSS IPSEASKKLL PREEWEKMKR KIILDIYYSE 480
  481 LDYTIIKHVI AMPLSSLIAQ IGGQFSLFAG GSLISLCQIV IYSVRYVMHK FCGLKSQRRR 540
  541 CRETREAHEA RQRRDMRRRR RNSTSHSRST PKPHNGNGNG KVVNVEMVTT HTSETTPPI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..599] PSI-BLAST 100.0 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle