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View Structure Prediction Details

Protein: CE04045
Organism: Caenorhabditis elegans
Length: 599 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE04045.

Description E-value Query
Range
Subject
Range
gi|114644825 - gi|114644825|ref|XP_001155207.1| PREDICTED: amiloride-sensitive cation channel 2, neuronal isoform 1...
gi|156103611, gi... - gi|21536349|ref|NP_001086.2| amiloride-sensitive cation channel 2, neuronal isoform b [Homo sapiens]...
422.0 [0..86] [589..4]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHQRRSTIR RTRFDEASCV MYMNGNFPET TVVRSHSLTQ SQSLSDSAES AIRRLKKENH  60
   61 CLKKTLSRRW SGRSRASTRS HDPTD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-599]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ASSLSDSSDD NDDSLYLLRE TSTLHGLRDV MLSSSGRLRM VWVLIVILAL FMTFQGCYQI  60
   61 MDEYSMRRIV VSYFIQEAQS IWVPDVVVCP YNRLNRSFIE ANNVSFELAQ FLELSFPSMD 120
  121 LPFENIQQQQ EEIISKIDTL DFQIEILLEQ NNMTYAQFLR KASLNCEAFF EDSRRCANTT 180
  181 EIMTSAGKCF RMAGIKQEIA GFGNGDRYVI DLPEEYYNPG INQMINSGVI IKLAERGQGI 240
  241 DNDLTFLPAG VHAIMPLLGT QFEFMNDPPR YECEEDPHGN YSRVHCFEDC LTLDAQQTCQ 300
  301 CSPAAAQNPA YPDKLCTATQ LYHCFFTKLF PEDSNLSKAI VDACKKECKA PCHAWNYNKQ 360
  361 VSYSSIPSEA SKKLLPREEW EKMKRKIILD IYYSELDYTI IKHVIAMPLS SLIAQIGGQF 420
  421 SLFAGGSLIS LCQIVIYSVR YVMHKFCGLK SQRRRCRETR EAHEARQRRD MRRRRRNSTS 480
  481 HSRSTPKPHN GNGNGKVVNV EMVTTHTSET TPPI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle