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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE04045
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHQRRSTIR RTRFDEASCV MYMNGNFPET TVVRSHSLTQ SQSLSDSAES AIRRLKKENH  60
   61 CLKKTLSRRW SGRSRASTRS HDPTDASSLS DSSDDNDDSL YLLRETSTLH GLRDVMLSSS 120
  121 GRLRMVWVLI VILALFMTFQ GCYQIMDEYS MRRIVVSYFI QEAQSIWVPD VVVCPYNRLN 180
  181 RSFIEANNVS FELAQFLELS FPSMDLPFEN IQQQQEEIIS KIDTLDFQIE ILLEQNNMTY 240
  241 AQFLRKASLN CEAFFEDSRR CANTTEIMTS AGKCFRMAGI KQEIAGFGNG DRYVIDLPEE 300
  301 YYNPGINQMI NSGVIIKLAE RGQGIDNDLT FLPAGVHAIM PLLGTQFEFM NDPPRYECEE 360
  361 DPHGNYSRVH CFEDCLTLDA QQTCQCSPAA AQNPAYPDKL CTATQLYHCF FTKLFPEDSN 420
  421 LSKAIVDACK KECKAPCHAW NYNKQVSYSS IPSEASKKLL PREEWEKMKR KIILDIYYSE 480
  481 LDYTIIKHVI AMPLSSLIAQ IGGQFSLFAG GSLISLCQIV IYSVRYVMHK FCGLKSQRRR 540
  541 CRETREAHEA RQRRDMRRRR RNSTSHSRST PKPHNGNGNG KVVNVEMVTT HTSETTPPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle