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Protein Overview: CE03543

General Information:
Name(s) found: CE03543 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011158 locus:chil-16 status:Partially_confirmed UniProt:Q21858 protein_id:CAA93862.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISVFKKLSR HYNNENFTPT FKKYCKYLWT ICLLLAFCGI VAYGLTFLIF RYYGNQDFII  60
   61 EHQEILYQLS TVKPDPINTK NRDYKKRIVG YYYRNGNDSI MMGQLAKLTH AVFAFLELHP 120
  121 DGTIHFESRK AKESFLYLRK LASILKFDAK IMFSIGGPAN TQFFSPIIQN EEMKRKFIDS 180
  181 IIYFLKQYKL DGVDLFWKWS SSGDKFTYSS FLQELKHKLR SHRQNYIISI VLPPAGVDTW 240
  241 ELGYDLEEIM EHVDFMNVYS MDYSGPWDNQ WGTPTGPSAP LAFNIGPRKN FNVDWTMKYY 300
  301 SCKTQQPGKF NMVIPFYARY WNNVQEAVDP RTEVFRNAEI RNNRADGVPY MDRSSADYKM 360
  361 ASWDNLTSTP YIWKPDERRF FTFENQKSIA IKTRYAIDMN LGGVWIWSVD MGDHGNVLLS 420
  421 AVASQEFLTS KNNGKNKYKC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A No confident structure predictions are available.
    2 View Details [80..440] PSI-BLAST 87.30103 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • growth factor activity
    		•  0.34357571678721 bayes_pls_golite062009
  • receptor binding
    		•  0.21634641574378 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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