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Protein Overview: col-119

General Information:
Name(s) found: col-119 / CE03091 [WormBase]
Description(s) found:
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  • WBGene00000693 locus:col-119 status:Confirmed UniProt:Q18799 protein_id:CAA92453.1 [WormBase]
  • pir||T20177 hypothetical protein C53B4.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3875169|emb|CAA92453.1| C. elegans protein C53B4.5, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17539418|ref|NP_501561.1| COLlagen family member (col-119) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE03091 WBGene00000693 locus:col-119 collagen status:Partially_confirmed TR:Q18799 protein_id:CAA92453.1 [wormpep150.fasta]
  • 03091 WBGene00000693 locus:col-119 collagen status:Partially_confirmed TR:Q18799 protein_id:CAA92453.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (col-119) [Caenorhabditis elegans]gi|3875169|emb|CAA92453.1| Hypothetical protein C53B4.5 [Caenorhabditis elegans]gi|7497860|pir||T20177 hypothetical protein C53B4.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:col-119 collagen status:Partially_confirmed TR:Q18799 protein_id:CAA92453.1 [wormpep115.fasta.reversed]
  • CE03091 collagen status:Partially_confirmed TR:Q18799 protein_id:CAA92453.1 [wormpep80.hongbin]
  • CE03091 WBGene00000693 locus:col-119 collagen status:Confirmed UniProt:Q18799_CAEEL protein_id:CAA92453.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE03091 WBGene00000693 locus:col-119 collagen status:Confirmed UniProt:Q18799_CAEEL protein_id:CAA92453.1| [wormORF-contam.fasta]
  • Hypothetical protein C53B4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C53B4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE03091 WBGene00000693 locus:col-119 collagen status:Confirmed TR:Q18799 protein_id:CAA92453.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE03091 WBGene00000693 locus:col-119 collagen status:Confirmed UniProt:Q18799 protein_id:CAA92453.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE03091 WBGene00000693 locus:col-119 status:Confirmed UniProt:Q18799 protein_id:CAA92453.1 [wormpep246-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-119 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIDSKIKAY RFVGYAALTF STVAVLSVCI TLPMVYNYIH HARKTMHHDI VECRAEAKKL  60
   61 WGDVNRVPDM VMAHNRTARQ VGNGQCEGCC LPGAQGPPGT PGRAGRPGKP GAPGLNGNPG 120
  121 RPPKEPCEPI TPPPCKPCPE GPPGPAGPPG PQGNKGPLGP PGPPGPEGPN GTAGNKGPAG 180
  181 PPGPGGKPGP AGPPGENGRN GEPQPGSPGE PGRPGQPGSR GPAGQPGKDG AQGGPGEKGA 240
  241 NGEPGQPGRD GQPGRPGQPG RDGHPGEKGV CPKYCALDGG VFFEDGSRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] PSI-BLAST 27.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle