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Protein Overview: CE02990

General Information:
Name(s) found: CE02990 [WormBase]
Description(s) found:
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  • WBGene00007465 locus:chil-1 status:Partially_confirmed UniProt:Q14V32 protein_id:CAK55172.1 [WormBase]
  • pir||T19113 hypothetical protein C08H9.4 - Caenorhabditis elegans [NCBI NR]
  • ref|NP_496129.1| chitinase family member (2K150) [Caenorhabditis elegans] [NCBI NR]
  • gi|115532450|ref|NP_001040740.1| hypothetical protein C08H9.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|109637993|emb|CAK55172.1| C. elegans protein C08H9.4b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • chitinase family member (2K150) [Caenorhabditis elegans]gi|7495715|pir||T19113 hypothetical protein C08H9.4 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • CE02990 chitinase status:Predicted TR:Q17838 protein_id:CAA91151.1 [wormpep80.hongbin]
  • CE02990 WBGene00007465 chitinase status:Partially_confirmed UniProt:Q14V32_CAEEL protein_id:CAK55172.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • [wormORF-contam.fasta]
  • CE02990 WBGene00007465 chitinase status:Partially_confirmed UniProt:Q14V32_CAEEL protein_id:CAK55172.1| [wormORF-contam.fasta]
  • CE02990 WBGene00007465 chitinase status:Partially_confirmed [wormpep160-contam.fasta]
  • Hypothetical protein C08H9.4b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C08H9.4b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE02990 WBGene00007465 chitinase status:Partially_confirmed TR:Q14V32 protein_id:CAK55172.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE02990 WBGene00007465 chitinase status:Partially_confirmed UniProt:Q14V32 protein_id:CAK55172.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE02990 WBGene00007465 locus:chil-1 status:Partially_confirmed UniProt:Q14V32 protein_id:CAK55172.1 [wormpep246-ecoli-contam.fasta]
  • CHItinase-Like OS=Caenorhabditis elegans GN=chil-1 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    chitin catabolic process [IEALink to PubMed article]
    Molecular Function: chitinase activity [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLNSTSPL LQNRNITPKT SCLTQWKHLV KPCFILIAIL VFSAPVAYSL SELIMIARHK  60
   61 SPTVSNLIKI VILSSKKSRT MIKTKSSTAT KYVGLPPLLD APNSNEALSP PAALCGKRIV 120
  121 GYFAEFENSG LTRKQLQMLT HIIYLFAIPR NGVITIVDDR SLRKFEEMKS NAREASSTLK 180
  181 IMISIGGHYN SRSFSGLVFN ETSRTVFVNS IVSFVEKYDI DGIEMFWMWP RYRDKNNYLM 240
  241 FIQELRYAFT ELQNKLNRKE DFVISLVASS NLNLLFNLVE FLNSVDFFGI YLFNSYSYQV 300
  301 GPDSPLYGGG SRNVDEIMKY YICKTGQPSK FNIIISFHAT YWEGTDLPLR DDSDNIWKVN 360
  361 ESGRLAVALR WRELPHHKWN LENIKFHNLT KTSYIWIPGP PTRFLTLEDE QSLREKNRYV 420
  421 ADHNIGGITM WTIDQDDDDH TLLKVVSSAE LCTGEEKNTI KYNCH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] MSA 1.252977 View MSA. No confident structure predictions are available.
    2 View Details [108..465] PSI-BLAST 86.39794 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.00445818053203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle