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Protein Overview: CE02692

General Information:
Name(s) found: CE02692 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00017814 status:Partially_confirmed UniProt:Q19807 protein_id:CCD67340.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 620 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPTPPIGIE DPMGIQQKAN EPPPPPPIVI CPTEVDHINV TLEKNQQCEC KDCGKLFNSV  60
   61 WYLKQHAVKH SNDRPFKCKF CFKTYKFRSN LYQHKCPERQ KSQLRRRGGN VISSSKRSDT 120
  121 QIIKTSKIET TIMQEEPQIN YNMPLQNCFS ETEDNDAPIT YGIVIQNIDQ TQMQQQMQPP 180
  181 QPSQAVPQHQ QQLQNQDMQQ VQPQQQAPSS MQNFQNFQMQ LPPVVDPLMN DMENTFDKQA 240
  241 DFDSVRGQQL PSQQIEDYVE KNKQKLFSCR KCRVFLPTEE AYMRHAASHN GEDLFPYKCS 300
  301 NCRQAFDNKK ELMRHTQTHT MDGGIFRCFE CCGQFKSQIA LRRHKDQCRP CFVPPTQNNI 360
  361 MVSVHSPFDP FSFIPDDNLF LPVCDELARA GTDSGVGSEG SPNSMSQASP ERNAMDESFS 420
  421 FLNGKKKDKE DDEDSGFRSR LNSVTHSCSP DSFSDSHCDS PPRKLSGGGG LGSSSFLGGY 480
  481 GTGPAYGQQM IYDKSLDDIE CDSYGMFNDA PAMYKQQIIS LQNKEFRGHG ITIAPLVQYH 540
  541 MQPMSMKDFS SQTSSSQIVV SSSECFDNDN RSWKNYGYDM PPIKTSEVKE LAAVLMTIYL 600
  601 CHAADQVADL LSTMAALSIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] FFAS03 6.44 No description for 2i13A was found.
    2 View Details [143..293] PSI-BLAST 18.522879 Transcription factor IIIA, TFIIIA
    3 View Details [294..352] FFAS03 4.08 Designed zinc finger protein
    4 View Details [353..620] PSI-BLAST 56.39794 No description for 2i13A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.5693324142242 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.20084827450202 bayes_pls_golite062009
  • DNA binding
    		•  1.11228868978256 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.10067326005752 bayes_pls_golite062009
  • transcription factor activity
    		•  0.33874886911135 bayes_pls_golite062009
  • protein binding
    		•  0.186544761618633 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle