| Protein: | CE02692 |
| Organism: | Caenorhabditis elegans |
| Length: | 620 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE02692.
| Description | E-value | Query Range |
Subject Range |
|
|
782.0 | [0..2] | [618..326] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MYPTPPIGIE DPMGIQQKAN EPPPPPPIVI CPTEVDHINV TLEKNQQCEC KDCGKLFNSV 60
61 WYLKQHAVKH SNDRPFKCKF CFKTYKFRSN LYQHKCPERQ KSQLRRRGGN VISSSKRSDT 120
121 QIIKTSKIET TIMQEEPQIN YN
|
| Detection Method: |  |
| Confidence: | 6.44 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [143-293] |
1 11 21 31 41 51
| | | | | |
1 MPLQNCFSET EDNDAPITYG IVIQNIDQTQ MQQQMQPPQP SQAVPQHQQQ LQNQDMQQVQ 60
61 PQQQAPSSMQ NFQNFQMQLP PVVDPLMNDM ENTFDKQADF DSVRGQQLPS QQIEDYVEKN 120
121 KQKLFSCRKC RVFLPTEEAY MRHAASHNGE D
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.5693324142242 | bayes_pls_golite062009 |
| transcription regulator activity | 1.20084827450202 | bayes_pls_golite062009 |
| DNA binding | 1.11228868978256 | bayes_pls_golite062009 |
| nucleic acid binding | 1.10067326005752 | bayes_pls_golite062009 |
| transcription factor activity | 0.33874886911135 | bayes_pls_golite062009 |
| protein binding | 0.186544761618633 | bayes_pls_golite062009 |
|
Region A: Residues: [294-352] |
1 11 21 31 41 51
| | | | | |
1 LFPYKCSNCR QAFDNKKELM RHTQTHTMDG GIFRCFECCG QFKSQIALRR HKDQCRPCF
|
| Detection Method: | |
| Confidence: | 4.08 |
| Match: | 1meyC |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [353-620] |
1 11 21 31 41 51
| | | | | |
1 VPPTQNNIMV SVHSPFDPFS FIPDDNLFLP VCDELARAGT DSGVGSEGSP NSMSQASPER 60
61 NAMDESFSFL NGKKKDKEDD EDSGFRSRLN SVTHSCSPDS FSDSHCDSPP RKLSGGGGLG 120
121 SSSFLGGYGT GPAYGQQMIY DKSLDDIECD SYGMFNDAPA MYKQQIISLQ NKEFRGHGIT 180
181 IAPLVQYHMQ PMSMKDFSSQ TSSSQIVVSS SECFDNDNRS WKNYGYDMPP IKTSEVKELA 240
241 AVLMTIYLCH AADQVADLLS TMAALSIQ
|
| Detection Method: | |
| Confidence: | 56.39794 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
