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Protein Overview: vha-9

General Information:
Name(s) found: vha-9 / CE02404 [WormBase]
Description(s) found:
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  • WBGene00006918 locus:vha-9 Probable V-type proton ATPase subunit F status:Confirmed UniProt:Q23680 protein_id:CAA88888.1 [WormBase]
  • pir||T28128 hypothetical protein ZK970.4 - Caenorhabditis elegans [NCBI NR]
  • gi|3881898|emb|CAA88888.1| C. elegans protein ZK970.4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2833318|sp|Q23680.1|VATF_CAEEL RecName: Full=Probable V-type proton ATPase subunit F; Short=V-ATPase subunit F; AltName: Full=Vacuolar proton pump subunit F [NCBI NR]
  • gi|17538021|ref|NP_496217.1| Vacuolar H ATPase family member (vha-9) [Caenorhabditis elegans] [NCBI NR]
  • Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE02404 WBGene00006918 locus:vha-9 H+-transporting ATPase status:Confirmed SW:Q23680 protein_id:CAA88888.1 [wormpep150.fasta]
  • 02404 WBGene00006918 locus:vha-9 H+-transporting ATPase status:Confirmed SW:Q23680 protein_id:CAA88888.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • vatf vacuolar ATP synthase like (13.3 kD) (2K592) [Caenorhabditis elegans]gi|3881898|emb|CAA88888.1| Hypothetical protein ZK970.4 [Caenorhabditis elegans]gi|7511442|pir||T28128 hypothetical protein ZK970.4 - Caenorhabditis elegansgi|2833318|sp|Q23680| [nrdb_11152004_Chlamydomonas]
  • H+-transporting ATPase status:Confirmed SW:Q23680 protein_id:CAA88888.1 [wormpep115.fasta.reversed]
  • CE02404 H+-transporting ATPase status:Confirmed SW:Q23680 protein_id:CAA88888.1 [wormpep80.hongbin]
  • CE02404 WBGene00006918 locus:vha-9 H+-transporting ATPase status:Confirmed UniProt:VATF_CAEEL protein_id:CAA88888.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE02404 WBGene00006918 locus:vha-9 H+-transporting ATPase status:Confirmed UniProt:VATF_CAEEL protein_id:CAA88888.1| [wormORF-contam.fasta]
  • Probable vacuolar ATP synthase subunit F (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) [nr-271106-contam.fasta]
  • Vacuolar H ATPase family member (vha-9) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein ZK970.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE02404 WBGene00006918 locus:vha-9 H+-transporting ATPase status:Confirmed UniProt:Q23680 protein_id:CAA88888.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE02404 WBGene00006918 locus:vha-9 status:Confirmed UniProt:Q23680 protein_id:CAA88888.1 Probable V-type proton ATPase subunit F [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 121 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAAKGKIL AVIGDEDTVV GFLLGGVGEL NKARKPNYLI VDKQTTVQEI EEAFNGFCAR  60
   61 DDIAIILINQ HIAEMIRYAV DNHTQSIPAV LEIPSKEAPY DPSKDSILNR ARGLFNPEDF 120
  121 R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 21.69897 No description for 2qaiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle