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Protein Overview: pde-4

General Information:
Name(s) found: pde-4 / CE02038 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00020114 locus:pde-4 Probable 3',5'-cyclic phosphodiesterase pde-4 status:Partially_confirmed UniProt:Q22000 protein_id:CCD69643.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    3',5'-cyclic-nucleotide phosphodiesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISLINNNN RSVRRKFGES GFTLRHGDDL IVTPFAQLLA SLRNVRSNLI SITNIQNSDD  60
   61 SRHANRSAKR PPLHNIELPD DVVHCAHDTL EELDWCLDQL ETIQTHRSVS EMASSKFRKM 120
  121 LNKELSHFAE SSKSGTQVSK FLITTYMDKE EDEPSIEIEV PTEVQGPSTS GPMTLSILKK 180
  181 AQTAAMNKIS GVRKLRAPSH DGHVPEYGVN CAREIAVHMQ RLDDWGPDVF KIDELSKNHS 240
  241 LTVVTFSLLR QRNLFKTFEI HQSTLVTYLL NLEHHYRNNH YHNFIHAADV AQSMHVLLMS 300
  301 PVLTEVFTDL EVLAAIFAGA VHDVDHPGFT NQYLINSNNE LAIMYNDESV LEQHHLAVAF 360
  361 KLLQDSNCDF LANLSRKQRL QFRKIVIDMV LATDMSKHMS LLADLKTMVE AKKVAGNNVI 420
  421 VLDKYNDKIQ VLQSMIHLAD LSNPTKPIEL YQQWNQRIME EYWRQGDKEK ELGLEISPMC 480
  481 DRGNVTIEKS QVGFIDYIVH PLYETWADLV YPDAQNILDQ LEENREWYQS RIPEEPDTAR 540
  541 TVTEDDEHK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] MSA 5.048987 View MSA. No confident structure predictions are available.
    2 View Details [73..162] MSA 2.085989 View MSA. No confident structure predictions are available.
    3 View Details [163..549] PSI-BLAST 122.0 Catalytic domain of cyclic nucleotide phosphodiesterase pde4d


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle