| Protein: | pde-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 549 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pde-4.
| Description | E-value | Query Range |
Subject Range |
|
|
628.0 | [0..1] | [545..729] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MSISLINNNN RSVRRKFGES GFTLRHGDDL IVTPFAQLLA SLRNVRSNLI SITNIQNSDD 60
61 SRHANRSAKR PP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [73-162] |
1 11 21 31 41 51
| | | | | |
1 LHNIELPDDV VHCAHDTLEE LDWCLDQLET IQTHRSVSEM ASSKFRKMLN KELSHFAESS 60
61 KSGTQVSKFL ITTYMDKEED EPSIEIEVPT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [163-549] |
1 11 21 31 41 51
| | | | | |
1 EVQGPSTSGP MTLSILKKAQ TAAMNKISGV RKLRAPSHDG HVPEYGVNCA REIAVHMQRL 60
61 DDWGPDVFKI DELSKNHSLT VVTFSLLRQR NLFKTFEIHQ STLVTYLLNL EHHYRNNHYH 120
121 NFIHAADVAQ SMHVLLMSPV LTEVFTDLEV LAAIFAGAVH DVDHPGFTNQ YLINSNNELA 180
181 IMYNDESVLE QHHLAVAFKL LQDSNCDFLA NLSRKQRLQF RKIVIDMVLA TDMSKHMSLL 240
241 ADLKTMVEAK KVAGNNVIVL DKYNDKIQVL QSMIHLADLS NPTKPIELYQ QWNQRIMEEY 300
301 WRQGDKEKEL GLEISPMCDR GNVTIEKSQV GFIDYIVHPL YETWADLVYP DAQNILDQLE 360
361 ENREWYQSRI PEEPDTARTV TEDDEHK
|
| Detection Method: | |
| Confidence: | 122.0 |
| Match: | 1oynA |
| Description: | Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |
Matching Structure (courtesy of the PDB): |
|
