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Protein Overview: rsp-4

General Information:
Name(s) found: rsp-4 / CE01891 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00004701 locus:rsp-4 Probable splicing factor, arginine\/serine-rich 4 status:Confirmed UniProt:Q09511 protein_id:CCD68734.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: embryonic development [IMP]
    morphogenesis of an epithelium [IMP]
    positive regulation of growth rate [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    body morphogenesis [IMP]
    gastrulation with mouth forming first [IMP]
    gastrulation [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRGGGGDRR AAPDINGLTS LKIDNLSYQT TPNDLRRTFE RYGDIGDVHI PRDKYSRQSK  60
   61 GFGFVRFYER RDAEHALDRT DGKLVDGREL RVTLAKYDRP SDERGGRGGG GGRRRSRSPR 120
  121 RRSRSPRYSR SRSPRRSRSR TRSPPSRDRR DSPDRRDNSR SRSRSPPPRE DGSPKERRSR 180
  181 SRSASRSPSR SRSNSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 20.09691 CBP20, 20KDa nuclear cap-binding protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle