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Protein Overview: lin-52

General Information:
Name(s) found: lin-52 / CE01711 [WormBase]
Description(s) found:
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  • WBGene00003035 locus:lin-52 Protein lin-52 status:Confirmed UniProt:Q10120 protein_id:CAA80188.1 [WormBase]
  • gi|3881702|emb|CAA80188.1| C. elegans protein ZK632.13, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|32492061|gb|AAP85302.1| LIN-52 [Caenorhabditis elegans] [NCBI NR]
  • pir||H88566 protein ZK632.13 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17556993|ref|NP_499179.1| abnormal cell LINeage family member (lin-52) [Caenorhabditis elegans] [NCBI NR]
  • gi|1353124|sp|Q10120.1|LIN52_CAEEL RecName: Full=Protein lin-52; AltName: Full=Abnormal cell lineage protein 52 [NCBI NR]
  • Protein lin-52 OS=Caenorhabditis elegans GN=lin-52 PE=1 SV=1 [Swiss-Prot]
  • (Q10120) Protein lin-52 (Abnormal cell lineage protein 52) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01711 WBGene00003035 locus:lin-52 status:Confirmed SW:Q10120 protein_id:CAA80188.1 [wormpep150.fasta]
  • 01711 WBGene00003035 locus:lin-52 status:Confirmed SW:Q10120 protein_id:CAA80188.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (18.2 kD) (3K914) [Caenorhabditis elegans]gi|32492061|gb|AAP85302.1| LIN-52 [Caenorhabditis elegans]gi|3881702|emb|CAA80188.1| Hypothetical protein ZK632.13 [Caenorhabditis elegans]gi|25395940|pir||H88566 protein ZK632.13 [impo [nrdb_11152004_Chlamydomonas]
  • locus:lin-52 status:Confirmed SW:Q10120 protein_id:CAA80188.1 [wormpep115.fasta.reversed]
  • CE01711 status:Partially_confirmed SW:Q10120 protein_id:CAA80188.1 [wormpep80.hongbin]
  • CE01711 WBGene00003035 locus:lin-52 status:Confirmed UniProt:Q10120 protein_id:CAA80188.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01711 WBGene00003035 locus:lin-52 status:Confirmed UniProt:Q10120 protein_id:CAA80188.1| [wormORF-contam.fasta]
  • Hypothetical protein ZK632.13 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • LIN-52 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Protein lin-52 (Abnormal cell lineage protein 52) [nr-271106-contam.fasta]
  • abnormal cell LINeage family member (lin-52) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01711 WBGene00003035 locus:lin-52 status:Confirmed UniProt:Q10120 protein_id:CAA80188.1 Protein lin-52 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 161 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development [IMPLink to PubMed article]
    negative regulation of vulval development [IMPLink to PubMed article]
    negative regulation of signal transduction [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRPLGFIGY EFGDDEMFVQ QMIEKKSNAE QAKMLEQQKK MLECTETMPE ESEPVPMKCL  60
   61 DFEEAFQSES VSKGYESPYK NISFLKEDAV TVNTMSHCPA DDIAKLIRNI QNSVYTLGIE 120
  121 EARQCRRGKL LNVLKPTGSA SPRYLQPTPP KNVAEETTGS Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle