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Protein Overview: CE01467

General Information:
Name(s) found: CE01467 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00007330 Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial status:Confirmed UniProt:Q09450 protein_id:CAA88202.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 521 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEALink to PubMed article]
    Biological Process: metabolic process [IEALink to PubMed article]
    Molecular Function: CoA-transferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILSKIWAA PAAGILRKTP RNAHQMRLIS MTSSMKAKVF NSAEEAVKDI PDNAKLLVGG  60
   61 FGLCGIPENL IQAITKTGQK GLTCVSNNAG VDNWGLGLLL QTRQIKKMIS SYVGENGEFA 120
  121 RQYLSGELEL EFTPQGTLAE RIRAAGAGVP AFYTPTGYGT QIQEGGAPIK YSKTEKGKIE 180
  181 VASKAKETRQ FNGINYVMEE AIWGDFALIK AWRADTLGNI QFRHAAGNFN NPMCKASKCT 240
  241 IVEVEEIVEP GVIAPNDVHI PSIYCHRLVL GKNYKKPIER PMFAHEGPIK PSTSAAGKSR 300
  301 EIIAARAALE FTDGMYANLG IGIPTLAPNY IPNGFTVHLQ SENGIIGVGP YPRKGTEDAD 360
  361 LINAGKEPIT LLKGASIVGS DESFAMIRGS HMDITVLGAL QCSQFGDLAN WMIPGKLVKG 420
  421 MGGAMDLVSA PGARVIVVME HVSKNGEPKI LEHCELPLTG KGVISRIITD MAVFDVDTKN 480
  481 GLTLIEVRKD LTVDDIKKLT ACKFEISENL KPMGQAPLNQ G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..521] PSI-BLAST 144.0 Succinate:CoA transferase, N-terminal domain; Succinate:CoA transferase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-oxoacid CoA-transferase activity
    		•  6.75362403628783 bayes_pls_golite062009
  • CoA-transferase activity
    		•  6.33801980618396 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  2.27849483078482 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.76453818684926 bayes_pls_golite062009
  • ribose-5-phosphate isomerase activity
    		•  1.45026197199737 bayes_pls_golite062009
  • catalytic activity
    		•  1.31732715713197 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  0.768278195752223 bayes_pls_golite062009
  • 6-phosphogluconolactonase activity
    		•  0.704371328304258 bayes_pls_golite062009
  • binding
    		•  0.555860104502432 bayes_pls_golite062009
  • isomerase activity
    		•  0.244145347107049 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle