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View Structure Prediction Details

Protein: CE01467
Organism: Caenorhabditis elegans
Length: 521 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01467.

Description E-value Query
Range
Subject
Range
gi|60098851, gi|... - gi|60592998|ref|NP_001006578.2| 3-oxoacid CoA transferase 1 [Gallus gallus], gi|60098851|emb|CAH6525...
515.0 [0..4] [516..19]

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Predicted Domain #1
Region A:
Residues: [1-521]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILSKIWAA PAAGILRKTP RNAHQMRLIS MTSSMKAKVF NSAEEAVKDI PDNAKLLVGG  60
   61 FGLCGIPENL IQAITKTGQK GLTCVSNNAG VDNWGLGLLL QTRQIKKMIS SYVGENGEFA 120
  121 RQYLSGELEL EFTPQGTLAE RIRAAGAGVP AFYTPTGYGT QIQEGGAPIK YSKTEKGKIE 180
  181 VASKAKETRQ FNGINYVMEE AIWGDFALIK AWRADTLGNI QFRHAAGNFN NPMCKASKCT 240
  241 IVEVEEIVEP GVIAPNDVHI PSIYCHRLVL GKNYKKPIER PMFAHEGPIK PSTSAAGKSR 300
  301 EIIAARAALE FTDGMYANLG IGIPTLAPNY IPNGFTVHLQ SENGIIGVGP YPRKGTEDAD 360
  361 LINAGKEPIT LLKGASIVGS DESFAMIRGS HMDITVLGAL QCSQFGDLAN WMIPGKLVKG 420
  421 MGGAMDLVSA PGARVIVVME HVSKNGEPKI LEHCELPLTG KGVISRIITD MAVFDVDTKN 480
  481 GLTLIEVRKD LTVDDIKKLT ACKFEISENL KPMGQAPLNQ G

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1m3eA
Description: Succinate:CoA transferase, N-terminal domain; Succinate:CoA transferase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-oxoacid CoA-transferase activity 6.75362403628783 bayes_pls_golite062009
CoA-transferase activity 6.33801980618396 bayes_pls_golite062009
intramolecular oxidoreductase activity 2.27849483078482 bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting aldoses and ketoses 1.76453818684926 bayes_pls_golite062009
ribose-5-phosphate isomerase activity 1.45026197199737 bayes_pls_golite062009
catalytic activity 1.31732715713197 bayes_pls_golite062009
transferase activity, transferring sulfur-containing groups 0.768278195752223 bayes_pls_golite062009
6-phosphogluconolactonase activity 0.704371328304258 bayes_pls_golite062009
binding 0.555860104502432 bayes_pls_golite062009
isomerase activity 0.244145347107049 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle