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Protein Overview: cnd-1

General Information:
Name(s) found: cnd-1 / CE01187 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00000561 locus:cnd-1 Neurogenic differentiation factor 1 status:Confirmed UniProt:P46581 protein_id:CCD66651.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 192 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    Biological Process: neuron differentiation [IMPLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    axonal fasciculation [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [ISSLink to PubMed article]
    transcription regulator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTDTSNFA PAEISKRKVR RVKANGRERA RMHGLNNALD MLREYIPITT QHQKLSKIET  60
   61 LRLARNYIDA LQRMLQTNEQ PTPLEYAHTL ANGLSQTTTN MLANLLQVQP RQLLPPSQFD 120
  121 IFSDPSHHQL HPSHPPPHSS FSSSSPSSSC SPPQYYYSPT QPSAAPLQGS CDPQYQQMYH 180
  181 QHSHQNTFNY SP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] PSI-BLAST 17.30103 Myc prot-oncogene protein
    2 View Details [103..192] MSA 8.350997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.33078862731285 bayes_pls_golite062009
  • DNA binding
    		•  1.47769879162301 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.40297587472455 bayes_pls_golite062009
  • transcription factor activity
    		•  1.37196407054029 bayes_pls_golite062009
  • protein binding
    		•  0.90375176425983 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.863712081656127 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle