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Protein Overview: CE01090

General Information:
Name(s) found: CE01090 [WormBase]
Description(s) found:
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  • WBGene00011637 locus:sds-22 Uncharacterized protein T09A5.9 status:Confirmed UniProt:P45969 protein_id:CAA85336.1 [WormBase]
  • pir||T24722 hypothetical protein T09A5.9 - Caenorhabditis elegans [NCBI NR]
  • gi|3879646|emb|CAA85336.1| C. elegans protein T09A5.9, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17536161|ref|NP_495653.1| hypothetical protein T09A5.9 [Caenorhabditis elegans] [NCBI NR]
  • gi|1176604|sp|P45969.1|YNZ9_CAEEL RecName: Full=Uncharacterized protein T09A5.9 [NCBI NR]
  • Uncharacterized protein T09A5.9 OS=Caenorhabditis elegans GN=T09A5.9 PE=4 SV=1 [Swiss-Prot]
  • Protein phosphatase 1 regulatory subunit SDS22 homolog OS=Caenorhabditis elegans GN=sds-22 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01090 WBGene00011637 SDS22 protein status:Confirmed SW:P45969 protein_id:CAA85336.1 [wormpep150.fasta]
  • 01090 WBGene00011637 SDS22 protein status:Confirmed SW:P45969 protein_id:CAA85336.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • protein regulatory (37.4 kD) (2I149) [Caenorhabditis elegans]gi|3879646|emb|CAA85336.1| Hypothetical protein T09A5.9 [Caenorhabditis elegans]gi|7507511|pir||T24722 hypothetical protein T09A5.9 - Caenorhabditis elegansgi|1176604|sp|P45969|YNZ9_CAEEL Hyp [nrdb_11152004_Chlamydomonas]
  • SDS22 protein status:Confirmed SW:P45969 protein_id:CAA85336.1 [wormpep115.fasta.reversed]
  • CE01090 SDS22 protein status:Confirmed SW:P45969 protein_id:CAA85336.1 [wormpep80.hongbin]
  • CE01090 WBGene00011637 SDS22 protein status:Confirmed UniProt:YNZ9_CAEEL protein_id:CAA85336.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01090 WBGene00011637 SDS22 protein status:Confirmed UniProt:YNZ9_CAEEL protein_id:CAA85336.1| [wormORF-contam.fasta]
  • Hypothetical protein T09A5.9 [nr-271106-contam.fasta]
  • Hypothetical protein T09A5.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T09A5.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01090 WBGene00011637 SDS22 protein status:Confirmed UniProt:P45969 protein_id:CAA85336.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01090 WBGene00011637 locus:sds-22 status:Confirmed UniProt:P45969 protein_id:CAA85336.1 Uncharacterized protein T09A5.9 [wormpep246-ecoli-contam.fasta]
  • CE01090 WBGene00011637 locus:sds-22 status:Confirmed UniProt:P45969 protein_id:CAA85336.1 Protein phosphatase 1 regulatory subunit SDS22 homolog [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNDKSAEVV VLPRENDEES KEPVLKNQFD LSTFDIDSPE IDLTHTRADH IPDLTGFPKI  60
   61 EELRMRNNLL VSISPTISSL VTLTSLDLYE NQLTEISHLE SLVNLVSLDL SYNRIRQING 120
  121 LDKLTKLETL YLVSNKIEKI ENLEALTQLK LLELGDNRIK KIENIGHLVN LDELFIGKNK 180
  181 IRQLEGVETL QKLSVLSLPG NRIVKIENVE QLNNLKELYL SDQGLQDIHG VEPLTNLLLL 240
  241 DVANNEIKTF SGVERLESLN DFWANDNKVE SFSEIEQLSK LKGLQTVYLE RNPFYFNDTN 300
  301 QYRRKVMMTL TQVTQIDATT CRKPIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 46.69897 No description for 2omuA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.87302803330255 bayes_pls_golite062009
  • receptor activity
    		•  0.823142813332745 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.569410390698942 bayes_pls_golite062009
  • signal transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.405945668463821 bayes_pls_golite062009
  • phosphatase regulator activity
    		•  0.276491806064691 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.246718758617065 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle