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Protein Overview: bbs-5

General Information:
Name(s) found: bbs-5 / CE01042 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010974 locus:bbs-5 status:Partially_confirmed UniProt:Q21626 protein_id:CAA83463.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: microtubule basal body [IDALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    gamma-tubulin complex [IDALink to PubMed article]
    Biological Process: phosphate metabolic process [IEALink to PubMed article]
    Molecular Function: magnesium ion binding [IEALink to PubMed article]
    inorganic diphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERVNGEDIW QDREIRFDVD HKLLRLINGE IQVAKIEHVE DTKGNNGDRG TMRVTNLRLI  60
   61 WHAASMPRIN ITIGWNAITG VQSKQTTSLV TRNRGISNEA IYVLAKVSAT TTKFEFIFTT 120
  121 TNPASHSKLF NTISSISRAY ETTKMYRELK MRGVFIREDG TLKILPQETI IEKVNGVWNL 180
  181 STETGSLGVF VITNIRVVWY AEMNIGYNVS VPYITLYSVR VRESKFGMAL VLETTTSSGE 240
  241 YVLGFRVDPA ERLQNLLKTV QSLHKAHLLK PIFGVSYVKE IAEKVEPRKD DDEIDIIDNN 300
  301 EDDVEIDDKI RPDAFASYFD GEHTATDEKQ LPVLNPELGL AIEPIRNGFT LHDLWNIHVD 360
  361 V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] MSA 1.017965 View MSA. No confident structure predictions are available.
    2 View Details [96..277] FFAS03 1.17 No description for 2cayA was found.
    3 View Details [278..361] MSA 1.016984 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.58524492821566 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.98407056573066 bayes_pls_golite062009
  • protein binding
    		•  1.98056222560389 bayes_pls_golite062009
  • actin binding
    		•  1.61982901191326 bayes_pls_golite062009
  • transporter activity
    		•  0.776034467431838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.194077384281661 bayes_pls_golite062009
  • actin filament binding
    		•  0.0719815025485184 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.0707105517897648 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.0620154731603239 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.0594013389870999 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle