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Protein Overview: sra-10

General Information:
Name(s) found: sra-10 / CE01001 [WormBase]
Description(s) found:
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  • WBGene00005036 locus:sra-10 Serpentine receptor class alpha-10 status:Partially_confirmed UniProt:Q20405 protein_id:CAA85456.1 [WormBase]
  • pir||T22187 hypothetical protein F44F4.5 - Caenorhabditis elegans [NCBI NR]
  • gi|71989245|ref|NP_001022162.1| Serpentine Receptor, class A (alpha) family member (sra-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|3877060|emb|CAA85456.1| C. elegans protein F44F4.5a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2500865|sp|Q20405.1|SRA10_CAEEL RecName: Full=Serpentine receptor class alpha-10; Short=Protein sra-10 [NCBI NR]
  • ref|NP_496344.1| serpentine Receptor, class A (alpha) (sra-10) [Caenorhabditis elegans] [NCBI NR]
  • Serpentine receptor class alpha-10 OS=Caenorhabditis elegans GN=sra-10 PE=2 SV=1 [Swiss-Prot]
  • (Q20405) Serpentine receptor class alpha 10 (Sra-10 protein) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE01001 WBGene00005036 locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed SW:Q20405 protein_id:CAA85456.1 [wormpep150.fasta]
  • 01001 WBGene00005036 locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed SW:Q20405 protein_id:CAA85456.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • serpentine Receptor, class A (alpha) (sra-10) [Caenorhabditis elegans]gi|3877060|emb|CAA85456.1| Hypothetical protein F44F4.5a [Caenorhabditis elegans]gi|7503405|pir||T22187 hypothetical protein F44F4.5 - Caenorhabditis elegansgi|2500865|sp|Q20405|SA10 [nrdb_11152004_Chlamydomonas]
  • locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed SW:Q20405 protein_id:CAA85456.1 [wormpep115.fasta.reversed]
  • CE01001 locus:sra-10 status:Predicted SW:Q20405 protein_id:CAA85456.1 [wormpep80.hongbin]
  • CE01001 WBGene00005036 locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:SRA10_CAEEL protein_id:CAA85456.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE01001 WBGene00005036 locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:SRA10_CAEEL protein_id:CAA85456.1| [wormORF-contam.fasta]
  • Serpentine receptor class alpha-10 (Protein sra-10) [nr-271106-contam.fasta]
  • Hypothetical protein F44F4.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine Receptor, class A (alpha) family member (sra-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE01001 WBGene00005036 locus:sra-10 7TM chemoreceptor, sra family status:Partially_confirmed UniProt:Q20405 protein_id:CAA85456.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE01001 WBGene00005036 locus:sra-10 status:Partially_confirmed UniProt:Q20405 protein_id:CAA85456.1 Serpentine receptor class alpha-10 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 336 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPITANSSK CATEDQMILQ TSLLLRINVI IMTIVAIITF ILTYKALFIL KIRPIFHSST  60
   61 KILLYTSLLF VNVHAVIFMV IQNTALIRSF TLSDKPCEIM RTTLECRFQN HVLIFGIAGV 120
  121 NFNQFGLTVD RLLATIIPQS YSHMGALPGV ILSVLVVACS IAAPLIIAIG DPYDDIVPNC 180
  181 FFFPEHSAPR ANIFLVTLST LVITSIFLNF IIIYANKKLE KGCRTRFYVT QRYQKREALI 240
  241 STRIISYIAA SQFLGLTLYS TMVLTLRLHK SMIPISIYHN MVWWAYTVPF AAVSLPALLI 300
  301 YRINQVGSNR KRVINRITAK VETQEEHMKS LKELWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] PSI-BLAST 46.69897 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle