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Protein Overview: CE00922

General Information:
Name(s) found: CE00922 [WormBase]
Description(s) found:
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  • WBGene00008008 status:Confirmed UniProt:Q18511 protein_id:CAA86320.1 [WormBase]
  • pir||T19827 hypothetical protein C38D4.9 - Caenorhabditis elegans [NCBI NR]
  • gi|3874828|emb|CAA86320.1| C. elegans protein C38D4.9, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17552558|ref|NP_497990.1| hypothetical protein C38D4.9 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE00922 WBGene00008008 methylase status:Confirmed TR:Q18511 protein_id:CAA86320.1 [wormpep150.fasta]
  • 00922 WBGene00008008 methylase status:Confirmed TR:Q18511 protein_id:CAA86320.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted RNA methylase like (23.9 kD) (3F893) [Caenorhabditis elegans]gi|3874828|emb|CAA86320.1| Hypothetical protein C38D4.9 [Caenorhabditis elegans]gi|7497189|pir||T19827 hypothetical protein C38D4.9 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • methylase status:Confirmed TR:Q18511 protein_id:CAA86320.1 [wormpep115.fasta.reversed]
  • CE00922 methylase status:Confirmed TR:Q18511 protein_id:CAA86320.1 [wormpep80.hongbin]
  • CE00922 WBGene00008008 methylase status:Confirmed UniProt:Q18511_CAEEL protein_id:CAA86320.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00922 WBGene00008008 methylase status:Confirmed UniProt:Q18511_CAEEL protein_id:CAA86320.1| [wormORF-contam.fasta]
  • C38D4.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C38D4.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE00922 WBGene00008008 methylase status:Confirmed UniProt:Q18511 protein_id:CAA86320.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00922 WBGene00008008 status:Confirmed UniProt:Q18511 protein_id:CAA86320.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C38D4.9 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: ubiquinone biosynthetic process [IEALink to PubMed article]
    methylation [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    methyltransferase activity [IEALink to PubMed article]
    2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDKKTLWML NELEGFEKPK IKLEQYATSS ELAVSMMEMI DETIGFEGKK LIDIGCGCGM  60
   61 LMTTAATMYE LETVLGVDID DEALKICSRN LETAEVQDRC ELLQADILDP ESDLPRGTFD 120
  121 VAVINPPFGT KNNAGIDMQF VQIGLQMVRP GGSVFSLHKS STRDYILKNA KKWDGVGAEC 180
  181 CAEMRWQLPA TYKFHKQKAV DIAVDLIHFK KLDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 21.221849 crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  0.444447673749491 bayes_pls_golite062009
  • catalytic activity
    		•  0.352837241386487 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0533354664784367 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0416815045255102 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle