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Protein Overview: tag-165

General Information:
Name(s) found: tag-165 / CE00868 [WormBase]
Description(s) found:
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  • WBGene00006510 locus:mtrr-1 Putative methionine synthase reductase status:Confirmed UniProt:Q17574 protein_id:CAA84637.1 [WormBase]
  • pir||T18838 hypothetical protein C01G6.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3873859|emb|CAA84637.1| C. elegans protein C01G6.6a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|20138955|sp|Q17574.1|MTRR_CAEEL RecName: Full=Putative methionine synthase reductase; Short=MSR [NCBI NR]
  • gi|17531441|ref|NP_495978.1| Temporarily Assigned Gene name family member (tag-165) [Caenorhabditis elegans] [NCBI NR]
  • Putative methionine synthase reductase OS=Caenorhabditis elegans GN=tag-165 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00868 WBGene00006510 locus:tag-165 NADPH-ferrihemoprotein reductase status:Partially_confirmed SW:Q17574 protein_id:CAA84637.1 [wormpep150.fasta]
  • 00868 WBGene00006510 locus:tag-165 NADPH-ferrihemoprotein reductase status:Partially_confirmed SW:Q17574 protein_id:CAA84637.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • methionine synthase reductase -cobalamin methyltransferase (76.8 kD) (2J577) [Caenorhabditis elegans]gi|3873859|emb|CAA84637.1| Hypothetical protein C01G6.6a [Caenorhabditis elegans]gi|7495144|pir||T18838 hypothetical protein C01G6.6 - Caenorhabditis el [nrdb_11152004_Chlamydomonas]
  • NADPH-ferrihemoprotein reductase status:Partially_confirmed SW:Q17574 protein_id:CAA84637.1 [wormpep115.fasta.reversed]
  • CE00868 NADPH-ferrihemoprotein reductase status:Partially_confirmed TR:Q17574 protein_id:CAA84637.1 [wormpep80.hongbin]
  • CE00868 WBGene00006510 locus:tag-165 NADPH-ferrihemoprotein reductase status:Confirmed UniProt:Q17574 protein_id:CAA84637.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00868 WBGene00006510 locus:tag-165 NADPH-ferrihemoprotein reductase status:Confirmed UniProt:Q17574 protein_id:CAA84637.1| [wormORF-contam.fasta]
  • Hypothetical protein C01G6.6a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Putative methionine synthase reductase (MSR) [nr-271106-contam.fasta]
  • Temporarily Assigned Gene name family member (tag-165) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE00868 WBGene00006510 locus:tag-165 NADPH-ferrihemoprotein reductase status:Confirmed SW:Q17574 protein_id:CAA84637.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00868 WBGene00006510 locus:mtrr-1 NADPH-ferrihemoprotein reductase status:Confirmed UniProt:Q17574 protein_id:CAA84637.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE00868 WBGene00006510 locus:mtrr-1 status:Confirmed UniProt:Q17574 protein_id:CAA84637.1 Putative methionine synthase reductase [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 682 amino acids

    Gene Ontology:
    Cellular Component: thylakoid membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    Molecular Function: NADP or NADPH binding [IEALink to PubMed article]
    FMN binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    FAD binding [IEALink to PubMed article]
    ferredoxin-NADP+ reductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDFLIAFGS QTGQAETIAK SLKEKAELIG LTPRLHALDE NEKKFNLNEE KLCAIVVSST  60
   61 GDGDAPDNCA RFVRRINRNS LENEYLKNLD YVLLGLGDSN YSSYQTIPRK IDKQLTALGA 120
  121 NRLFDRAEAD DQVGLELEVE PWIEKFFATL ASRFDISADK MNAITESSNL KLNQVKTEEE 180
  181 KKALLQKRIE DEESDDEGRG RVIGIDMLIP EHYDYPEISL LKGSQTLSND ENLRVPIAPQ 240
  241 PFIVSSVSNR KLPEDTKLEW QNLCKMPGVV TKPFEVLVVS AEFVTDPFSK KIKTKRMITV 300
  301 DFGDHAAELQ YEPGDAIYFC VPNPALEVNF ILKRCGVLDI ADQQCELSIN PKTEKINAQI 360
  361 PGHVHKITTL RHMFTTCLDI RRAPGRPLIR VLAESTSDPN EKRRLLELCS AQGMKDFTDF 420
  421 VRTPGLSLAD MLFAFPNVKP PVDRLIELLP RLIPRPYSMS SYENRKARLI YSEMEFPATD 480
  481 GRRHSRKGLA TDWLNSLRIG DKVQVLGKEP ARFRLPPLGM TKNSAGKLPL LMVGPGTGVS 540
  541 VFLSFLHFLR KLKQDSPSDF VDVPRVLFFG CRDSSVDAIY MSELEMFVSE GILTDLIICE 600
  601 SEQKGERVQD GLRKYLDKVL PFLTASTESK IFICGDAKGM SKDVWQCFSD IVASDQGIPD 660
  661 LEAKKKLMDL KKSDQYIEDV WG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] FFAS03 3.0 A CRYSTALLOGRAPHIC STRUCTURAL STUDY OF THE OXIDATION STATES OF DESULFOVIBRIO VULGARIS FLAVODOXIN
    2 View Details [72..682] PSI-BLAST 111.0 NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  3.51215695612257 bayes_pls_golite062009
  • arginine binding
    		•  3.31453699236145 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor
    		•  3.111558299994 bayes_pls_golite062009
  • NADH dehydrogenase (ubiquinone) activity
    		•  3.08675205479908 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.02740987944465 bayes_pls_golite062009
  • tetrahydrobiopterin binding
    		•  3.017442325411 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  2.33166813913888 bayes_pls_golite062009
  • NADH dehydrogenase (quinone) activity
    		•  2.25895189750633 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  2.0960591627763 bayes_pls_golite062009
  • FAD binding
    		•  2.07600122867642 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.07119387257991 bayes_pls_golite062009
  • coenzyme binding
    		•  1.94345417147733 bayes_pls_golite062009
  • binding
    		•  1.76189957257133 bayes_pls_golite062009
  • nitric-oxide synthase activity
    		•  1.73361245661515 bayes_pls_golite062009
  • cytochrome-b5 reductase activity
    		•  1.5685421124725 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • phosphoric diester hydrolase activity
    		•  1.30413377266725 bayes_pls_golite062009
  • NADP or NADPH binding
    		•  1.18833847639357 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen
    		•  0.878188072733981 bayes_pls_golite062009
  • oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
    		•  0.73388842564789 bayes_pls_golite062009
  • transferase activity
    		•  0.708491789248912 bayes_pls_golite062009
  • FMN binding
    		•  0.649158247260553 bayes_pls_golite062009
  • NAD(P)H oxidase activity
    		•  0.46219666758416 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  0.380537461428523 bayes_pls_golite062009
  • protein binding
    		•  0.244726474314668 bayes_pls_golite062009
  • cofactor binding
    		•  0.205324283520452 bayes_pls_golite062009
  • transcription factor binding
    		•  0.065157440608373 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.0373671593900911 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.37

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle