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Protein Overview: ubxn-4

General Information:
Name(s) found: ubxn-4 / CE00392 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00022703 locus:ubxn-4 UBX domain-containing protein 4 status:Confirmed UniProt:P34631 protein_id:CCD73207.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWFGGNVAT AIQISRKNKA LLIVYITTDS EDGQIFDGFW QHIDSSNLLC AVVGIKLKAG  60
   61 ETSAQQFADI YPTPILPAAY LIDQNGKPLE VITPLVGKTY DQFRAKFDKA TAQFVNGMPT 120
  121 AAANQLSTPS PSPAPVQVPA STDAPIPAPT PVTAPIQSSS TSQEMTRELA EKVARAKALL 180
  181 EQKKQKDAEK KREADKHVKE EMTKAREAKQ ERDAEALVKA AKQRKMEKLA AESDKKRILA 240
  241 QIKADREAAQ KKFGKLVNTE NASENTEKKQ ETTVGKAVPS DRCRLQVRLP DGSTFVEEFP 300
  301 SNDVLNSLVE IIRQKPSIAG TTFEIQQPYP RRIFTNDDYS KTFLENQLTP STALVVIQKS 360
  361 SGSSSNYGSF SLSTQTVSFV TWVLYPLTAF WNIFCGMIGW NSTGKQQDSK SKKNDGPSTS 420
  421 GQSGSQPQRR GMPRSAEVRR RGNVAGLENP NEDDPEERAS FNGNSTQFM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 3.09691 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
    2 View Details [277..368] PSI-BLAST 19.522879 No description for 2dzkA was found.
    3 View Details [369..469] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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