| Protein: | ubxn-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 469 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubxn-4.
| Description | E-value | Query Range |
Subject Range |
|
|
301.0 | [0..1] | [469..22] |
|
Region A: Residues: [1-276] |
1 11 21 31 41 51
| | | | | |
1 MQWFGGNVAT AIQISRKNKA LLIVYITTDS EDGQIFDGFW QHIDSSNLLC AVVGIKLKAG 60
61 ETSAQQFADI YPTPILPAAY LIDQNGKPLE VITPLVGKTY DQFRAKFDKA TAQFVNGMPT 120
121 AAANQLSTPS PSPAPVQVPA STDAPIPAPT PVTAPIQSSS TSQEMTRELA EKVARAKALL 180
181 EQKKQKDAEK KREADKHVKE EMTKAREAKQ ERDAEALVKA AKQRKMEKLA AESDKKRILA 240
241 QIKADREAAQ KKFGKLVNTE NASENTEKKQ ETTVGK
|
| Detection Method: |  |
| Confidence: | 3.09691 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [277-368] |
1 11 21 31 41 51
| | | | | |
1 AVPSDRCRLQ VRLPDGSTFV EEFPSNDVLN SLVEIIRQKP SIAGTTFEIQ QPYPRRIFTN 60
61 DDYSKTFLEN QLTPSTALVV IQKSSGSSSN YG
|
| Detection Method: | |
| Confidence: | 19.522879 |
| Match: | 2dzkA |
| Description: | No description for 2dzkA was found. |
|
Region A: Residues: [369-469] |
1 11 21 31 41 51
| | | | | |
1 SFSLSTQTVS FVTWVLYPLT AFWNIFCGMI GWNSTGKQQD SKSKKNDGPS TSGQSGSQPQ 60
61 RRGMPRSAEV RRRGNVAGLE NPNEDDPEER ASFNGNSTQF M
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
