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Protein Overview: tbg-1

General Information:
Name(s) found: tbg-1 / CE00224 [WormBase]
Description(s) found:
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  • WBGene00006540 locus:tbg-1 Tubulin gamma chain status:Confirmed UniProt:P34475 protein_id:CAA80164.1 [WormBase]
  • pir||S40980 hypothetical protein F58A4.8 - Caenorhabditis elegans [NCBI NR]
  • gi|464856|sp|P34475.1|TBG_CAEEL RecName: Full=Tubulin gamma chain; AltName: Full=Gamma-tubulin [NCBI NR]
  • gi|3877823|emb|CAA80164.1| C. elegans protein F58A4.8, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17555356|ref|NP_499131.1| TuBulin Gamma family member (tbg-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|10944330|gb|AAG24513.1|AF287259_1 gamma-tubulin [Caenorhabditis elegans] [NCBI NR]
  • Tubulin gamma chain OS=Caenorhabditis elegans GN=tbg-1 PE=2 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00224 WBGene00006540 locus:tbg-1 Gamma-like tubulin status:Confirmed SW:P34475 protein_id:CAA80164.1 [wormpep150.fasta]
  • 00224 WBGene00006540 locus:tbg-1 Gamma-like tubulin status:Confirmed SW:P34475 protein_id:CAA80164.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • TuBulin Gamma, Spindle ASsembly abnormal SAS-3 (49.9 kD) (sas-3) [Caenorhabditis elegans]gi|3877823|emb|CAA80164.1| Hypothetical protein F58A4.8 [Caenorhabditis elegans]gi|10944330|gb|AAG24513.1| gamma-tubulin [Caenorhabditis elegans]gi|482187|pir||S40 [nrdb_11152004_Chlamydomonas]
  • locus:tbg-1 Gamma-like tubulin status:Confirmed SW:P34475 protein_id:CAA80164.1 [wormpep115.fasta.reversed]
  • CE00224 locus:tbg-1 Gamma-like tubulin status:Confirmed SW:P34475 protein_id:CAA80164.1 [wormpep80.hongbin]
  • CE00224 WBGene00006540 locus:tbg-1 Gamma-like tubulin status:Confirmed UniProt:TBG_CAEEL protein_id:CAA80164.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00224 WBGene00006540 locus:tbg-1 Gamma-like tubulin status:Confirmed UniProt:TBG_CAEEL protein_id:CAA80164.1| [wormORF-contam.fasta]
  • Hypothetical protein F58A4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Tubulin gamma chain (Gamma tubulin) [nr-271106-contam.fasta]
  • TuBulin Gamma family member (tbg-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • gamma-tubulin [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE00224 WBGene00006540 locus:tbg-1 Gamma-like tubulin status:Confirmed UniProt:P34475 protein_id:CAA80164.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00224 WBGene00006540 locus:tbg-1 status:Confirmed UniProt:P34475 protein_id:CAA80164.1 Tubulin gamma chain [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: centrosome [IDALink to PubMed article]
    protein complex [IEALink to PubMed article]
    microtubule [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    protein polymerization [IEALink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    mitotic spindle organization [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    microtubule nucleation [IMPLink to PubMed article]
    mitotic sister chromatid segregation [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    microtubule-based process [IEALink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    structural constituent of cytoskeleton [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGTGALMTV HVGQCGNQLA QAFWKSMVDE HGINERGQTT HEDDMNDKKD LLFYQADDDH  60
   61 YVPRAVLVDL EPRVINGMMQ SPNFSNLFNT DNIFMSDHGG GAGNNWASGY CQGQEVQEKI 120
  121 MDIIIREAEN TNNLDGILFT HSVSGGTGSG TGSLLLERLR EAFPKKVIQT YSVFANSDTS 180
  181 TDVVVHPYNW VLSMQRLIEN PDHVVVLDNA ALHRLAAGKF KTDTPTFDHI NSLVARIMST 240
  241 STAPYRFNSA MCPSIRYLDL APFPPMHFIQ SAISPVVDPN ENFTRKTSVA DVTRFLLKPT 300
  301 SMMVSTASRV RPNDCMLSAY MFLQGQIEAH TIMTAEQNVD FAIRRPPFYM LKPLRMMHAP 360
  361 LSPYVRPQYK VSGLLLNNST SVAPLFESLL SKYDKLRSKR AFIDKFEKID NFSLDMMDDA 420
  421 MHIVQDLLDE YKAVVQKDYL TRGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..444] PSI-BLAST 116.0 Crystal structure of human gamma-tubulin bound to GTPgammaS


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle