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Protein Overview: CE00212

General Information:
Name(s) found: CE00212 [WormBase]
Description(s) found:
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  • WBGene00010131 Putative cytochrome b561 status:Partially_confirmed UniProt:P34465 protein_id:CAA81603.1 [WormBase]
  • pir||S40988 hypothetical protein F55H2.5 - Caenorhabditis elegans [NCBI NR]
  • gi|461668|sp|P34465.1|CY561_CAEEL RecName: Full=Putative cytochrome b561; Short=Cytochrome b-561 [NCBI NR]
  • gi|3877611|emb|CAA81603.1| C. elegans protein F55H2.5, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17553642|ref|NP_499095.1| hypothetical protein F55H2.5 [Caenorhabditis elegans] [NCBI NR]
  • Putative cytochrome b561 OS=Caenorhabditis elegans GN=F55H2.5 PE=3 SV=1 [Swiss-Prot]
  • (P34465) Putative cytochrome b561 (Cytochrome b-561) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE00212 WBGene00010131 Cytochrome B561 status:Partially_confirmed SW:P34465 protein_id:CAA81603.1 [wormpep150.fasta]
  • 00212 WBGene00010131 Cytochrome B561 status:Partially_confirmed SW:P34465 protein_id:CAA81603.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cytochrome 561 (3K601) [Caenorhabditis elegans]gi|3877611|emb|CAA81603.1| Hypothetical protein F55H2.5 [Caenorhabditis elegans]gi|482195|pir||S40988 hypothetical protein F55H2.5 - Caenorhabditis elegansgi|461668|sp|P34465|C561_CAEEL Putative cytochrome [nrdb_11152004_Chlamydomonas]
  • Cytochrome B561 status:Partially_confirmed SW:P34465 protein_id:CAA81603.1 [wormpep115.fasta.reversed]
  • CE00212 Cytochrome B561 status:Predicted SW:P34465 protein_id:CAA81603.1 [wormpep80.hongbin]
  • CE00212 WBGene00010131 Cytochrome B561 status:Partially_confirmed UniProt:P34465 protein_id:CAA81603.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE00212 WBGene00010131 Cytochrome B561 status:Partially_confirmed UniProt:P34465 protein_id:CAA81603.1| [wormORF-contam.fasta]
  • Hypothetical protein F55H2.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F55H2.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Putative cytochrome b561 (Cytochrome b-561) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE00212 WBGene00010131 status:Partially_confirmed UniProt:P34465 protein_id:CAA81603.1 Putative cytochrome b561 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLLFDPGFV ILREDQSVKL FNIILVMSQV FGGLAVLLVT IWMSKFESGF AWNEDPDKEF  60
   61 NYHPTFMIMG MVFLFGEALL VYRVFRNERK KFSKTLHVIL HSCVLVFMLM ALKAVFDYHN 120
  121 LHKDPSGNPA PIVNLVSLHS WIGLSVVILY FAQYIVGFIT YFFPGMPIPI RQLVMPFHQM 180
  181 FGVLIFIFVS ITVAMGISER AAWKHTCWTK EGQMCAQQAT SSFVGVFTFL YTVCVLLLVL 240
  241 NPRWKRQSLP EEEGLHHLTS SHSMSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] MSA 7.184997 View MSA. No confident structure predictions are available.
    2 View Details [89..266] FFAS03 1.43 Formate dehydrogenase N, cytochrome (gamma) subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  2.24134626575144 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.16033652346908 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.10239062961513 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.92147086144537 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.43738995572558 bayes_pls_golite062009
  • transporter activity
    		•  1.42939864657946 bayes_pls_golite062009
  • binding
    		•  0.834868466003016 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.449446624205262 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.356062770721127 bayes_pls_golite062009
  • catalytic activity
    		•  0.349353660965659 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.290385250066699 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  0.143276144501499 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  0.143276144501499 bayes_pls_golite062009
  • protein binding
    		•  0.139150702094492 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle