| Protein: | CE00212 |
| Organism: | Caenorhabditis elegans |
| Length: | 266 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE00212.
| Description | E-value | Query Range |
Subject Range |
|
|
262.0 | [0..16] | [255..282] |
|
|
259.0 | [0..1] | [266..1] |
|
|
228.0 | [0..16] | [255..7] |
|
|
226.0 | [0..15] | [261..117] |
|
|
226.0 | [0..15] | [260..99] |
|
|
225.0 | [0..16] | [255..8] |
|
|
224.0 | [0..10] | [255..3] |
|
|
224.0 | [0..20] | [255..12] |
|
|
223.0 | [0..16] | [255..8] |
|
|
223.0 | [0..27] | [255..28] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MSLLFDPGFV ILREDQSVKL FNIILVMSQV FGGLAVLLVT IWMSKFESGF AWNEDPDKEF 60
61 NYHPTFMIMG MVFLFGEALL VYRVFRNE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-266] |
1 11 21 31 41 51
| | | | | |
1 RKKFSKTLHV ILHSCVLVFM LMALKAVFDY HNLHKDPSGN PAPIVNLVSL HSWIGLSVVI 60
61 LYFAQYIVGF ITYFFPGMPI PIRQLVMPFH QMFGVLIFIF VSITVAMGIS ERAAWKHTCW 120
121 TKEGQMCAQQ ATSSFVGVFT FLYTVCVLLL VLNPRWKRQS LPEEEGLHHL TSSHSMSD
|
| Detection Method: | |
| Confidence: | 1.43 |
| Match: | 1kqfC |
| Description: | Formate dehydrogenase N, cytochrome (gamma) subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cation transmembrane transporter activity | 2.24134626575144 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.16033652346908 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.10239062961513 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.92147086144537 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.43738995572558 | bayes_pls_golite062009 |
| transporter activity | 1.42939864657946 | bayes_pls_golite062009 |
| binding | 0.834868466003016 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.449446624205262 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.356062770721127 | bayes_pls_golite062009 |
| catalytic activity | 0.349353660965659 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.290385250066699 | bayes_pls_golite062009 |
| ubiquinol-cytochrome-c reductase activity | 0.143276144501499 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 0.143276144501499 | bayes_pls_golite062009 |
| protein binding | 0.139150702094492 | bayes_pls_golite062009 |
