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Protein Overview: SPCC1183.11

General Information:
Name(s) found: SPCC1183.11 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • MS ion channel protein 1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1011 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISSLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: ion transport [ISSLink to PubMed article]
    transmembrane transport [IEA]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: mechanically-gated ion channel activity [ISSLink to PubMed article]
    calcium ion binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPTSPTSS PGRHHWSNSK DGMPPEYTNQ DPNSDQADNE NSDAKAHQPQ HSPQHSTENQ  60
   61 GHTGTSDTSS LEMELSKLHP ESKQRQLPHS PEHERSRSPI ASVVSYRSHM TLEDENQIFN 120
  121 AEMAVRGSQS LQRRPTGRSV RGSMRRLSSH RSKSMRTSKS KKSGDYERTA ENEEAAQEAE 180
  181 NHLDNFGVVT FGTEAPIKAP DHPVTIFGRI FKFIQQRSFY LRSLIYIIPL GVLLLIPVFI 240
  241 GRFYHPQPPY RDELGHEYER HLHVGGVDLM WMAIWWEIIW LSIWAARYAA KVIPYFFAFF 300
  301 VSFISNNVTK WRCMAVALEF PITLFLWMLA VYVSFLPIMT RRHIGDYGVP DHVRVKLPWQ 360
  361 QSANNVLITL FITSIMNLVE KVLMQLIAMS LHRREYESRI LYNKFAINEL ARLYGYARQR 420
  421 SFDFKDAIHR AQADVFKFAD HQHGKKRAAA ARVAQNALNK TTYKAISAFN FATDMVNKVA 480
  481 GEITNREVEK SSSPKSVVLH LLKTTRGCQS LARCLFEALV NPENPDLVLD DFIPVYTDET 540
  541 GEVDNATLEA CYSIFDRDLN GDITCEEIEL ACVEIGKERK SISASLRDLN DSISKLDGIC 600
  601 MFIVAVITLF IFLYLIARNF SGVLTSAGTT LLGLSWLFSG SAQELLSSII FVFVKHPYDV 660
  661 GDRVDVMING TVTSAMVKEI SIMSTEFRLL TGKVIQAPNS LLNTLWILNM RRSDGIADPV 720
  721 TVNLKFGTTL QQIEQLRIKI IDFLKEEKRD YKPDLLTEVT DLPDLYSMSL CVVFFHKYNF 780
  781 QDEVLRMRRR NMFMCALMTY MQELDIVSPI FNSPGKSKDS PMYVNFNNGS MEGVKLSGGN 840
  841 DGGGTENHRD STVGGGILKN PKAYPYREPT PPGSSDSDTA SVSKKRVDFS LGTRHLMPAF 900
  901 DDVADIGSKR LGRDSLPDAV IENAGTEAMR REAEERRRAE EEEYERSQQE SSSNEENENA 960
  961 SRTSGARFSF SSKASRLSAR PSARTVPPLQ HISIQDLREP NENNTSKSAR L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] MSA 15.243997 View MSA. No confident structure predictions are available.
    2 View Details [219..449] FFAS03 1.01 Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli
    3 View Details [450..527] deduced N/A No confident structure predictions are available.
    4 View Details [528..828] PSI-BLAST 65.0 No description for 2oauA was found.
    5 View Details [829..1011] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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