| Protein: | SPCC1183.11 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1011 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1183.11.
| Description | E-value | Query Range |
Subject Range |
|
|
689.0 | [0..35] | [1011..1] |
|
|
485.0 | [0..128] | [980..1] |
|
|
461.0 | [0..104] | [994..3] |
|
|
455.0 | [0..27] | [961..2] |
|
|
426.0 | [0..132] | [990..8] |
|
|
424.0 | [0..16] | [844..36] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MSSPTSPTSS PGRHHWSNSK DGMPPEYTNQ DPNSDQADNE NSDAKAHQPQ HSPQHSTENQ 60
61 GHTGTSDTSS LEMELSKLHP ESKQRQLPHS PEHERSRSPI ASVVSYRSHM TLEDENQIFN 120
121 AEMAVRGSQS LQRRPTGRSV RGSMRRLSSH RSKSMRTSKS KKSGDYERTA ENEEAAQEAE 180
181 NHLDNFGVVT FGTEAPIKAP DHPVTIFGRI FKFIQQRS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [219-449] |
1 11 21 31 41 51
| | | | | |
1 FYLRSLIYII PLGVLLLIPV FIGRFYHPQP PYRDELGHEY ERHLHVGGVD LMWMAIWWEI 60
61 IWLSIWAARY AAKVIPYFFA FFVSFISNNV TKWRCMAVAL EFPITLFLWM LAVYVSFLPI 120
121 MTRRHIGDYG VPDHVRVKLP WQQSANNVLI TLFITSIMNL VEKVLMQLIA MSLHRREYES 180
181 RILYNKFAIN ELARLYGYAR QRSFDFKDAI HRAQADVFKF ADHQHGKKRA A
|
| Detection Method: | |
| Confidence: | 1.01 |
| Match: | 2akhZ |
| Description: | Normal mode-based flexible fitted coordinates of a non-translocating SecYEG protein-conducting channel into the cryo-EM map of a SecYEG-nascent chain-70S ribosome complex from E. coli |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [450-527] |
1 11 21 31 41 51
| | | | | |
1 AARVAQNALN KTTYKAISAF NFATDMVNKV AGEITNREVE KSSSPKSVVL HLLKTTRGCQ 60
61 SLARCLFEAL VNPENPDL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [528-828] |
1 11 21 31 41 51
| | | | | |
1 VLDDFIPVYT DETGEVDNAT LEACYSIFDR DLNGDITCEE IELACVEIGK ERKSISASLR 60
61 DLNDSISKLD GICMFIVAVI TLFIFLYLIA RNFSGVLTSA GTTLLGLSWL FSGSAQELLS 120
121 SIIFVFVKHP YDVGDRVDVM INGTVTSAMV KEISIMSTEF RLLTGKVIQA PNSLLNTLWI 180
181 LNMRRSDGIA DPVTVNLKFG TTLQQIEQLR IKIIDFLKEE KRDYKPDLLT EVTDLPDLYS 240
241 MSLCVVFFHK YNFQDEVLRM RRRNMFMCAL MTYMQELDIV SPIFNSPGKS KDSPMYVNFN 300
301 N
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2oauA |
| Description: | No description for 2oauA was found. |
|
Region A: Residues: [829-1011] |
1 11 21 31 41 51
| | | | | |
1 GSMEGVKLSG GNDGGGTENH RDSTVGGGIL KNPKAYPYRE PTPPGSSDSD TASVSKKRVD 60
61 FSLGTRHLMP AFDDVADIGS KRLGRDSLPD AVIENAGTEA MRREAEERRR AEEEEYERSQ 120
121 QESSSNEENE NASRTSGARF SFSSKASRLS ARPSARTVPP LQHISIQDLR EPNENNTSKS 180
181 ARL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
