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Protein Overview: cog1

General Information:
Name(s) found: cog1 / SPAC144.15c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • Golgi transport complex subunit Cog1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: Golgi transport complex [ISSLink to PubMed article]
    nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: intra-Golgi vesicle-mediated transport [ISSLink to PubMed article]
    retrograde transport, vesicle recycling within Golgi [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVETDLMSSH SSNWKEIFRT HSIAQTIQLE KFVSQQIEEK GRELQQNVCF NYQSFIEASE  60
   61 NLSNIRNNLE KVLQNSYEFQ SMVSLPKVDR VSKFLSDNES ISQTSGDYFI FLQRFYAHAI 120
  121 LFVMELFNKE QYLQSSKLLI FCLRILPADL PNDHQCHILV NRLESCKNYL NNRLKQAMTS 180
  181 SLSKVSVVTS WILLNQANIS SGLDIFLQEC EDQLLILNDA REFSLTFLNT LKLARDFPNE 240
  241 IRSYLEASKN FNIFKEKEIL RNICLDECYL KAYFSAEDVK VTTPFETLQQ FDGDNILQQW 300
  301 KLSFFSKISH SEKSFFSNAT SLTTLYQILE GLLSELSEPQ FKEFYELWNS ILQNHFIISS 360
  361 RNIIDSLGLY VNKIKEKLQI CFEIPPTNSF DPWSFQLKQQ VLNELKQNIL PACGMDDGFQ 420
  421 RFWQSLASFD MVLDESLQVL KKLQTLHLSF TLGDIIPNYL TLADYLLNFV KTSFAQIYEL 480
  481 VCSFVNNVAV MESSSEKQLR TSRCLKIVRL LKQFRHMDES VPFDDLIYKL QNILVRELTD 540
  541 FTTGIYINES KINLDVAACI TGNFFGPSFA LYNSLIMLID KLEVLGFDIV SDKFKGLLTP 600
  601 NLFESLFILN LERLKAAKSM DHMKQNTFDM EFINYLSDFT NNPREVIDYQ HFIELIDLHV 660
  661 QDEFSKEDFD TVRANVKECV PKLLSFFTVL LPRVKAQKVI T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] Pfam 21.327902 No description for PF08700.2 was found. No confident structure predictions are available.
    2 View Details [98..276] deduced N/A No confident structure predictions are available.
    3 View Details [277..388] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [389..520] deduced N/A Confident ab initio structure predictions are available.
    5 View Details [521..701] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle