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Protein Overview: rtt109

General Information:
Name(s) found: rtt109 / SPBC342.06c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • RTT109 family histone lysine acetyltransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 369 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: chromatin silencing at centromere [IGILink to PubMed article][IMPLink to PubMed article]
    histone acetylation [IMPLink to PubMed article]
    response to DNA damage stimulus [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: histone acetyltransferase activity (H3-K56 specific) [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLWSESIL EGRKLSIYHL KSTLEKCPFL FGQSKKSKDF QFGSHLFLVE EQNVFIFGME  60
   61 CIVYEKNKEF IVFVSKADST GFGSKGVSCN SLAFCCLVTL IDGLRKQGAE NVTLTLFAIA 120
  121 QGQYLFPESV DNGQKHVLND SGLLRWWVNC LEKLRKYYTD SEAPNDSEKQ KNSTLLPKAY 180
  181 LFVPGLENIR SYLPNRHWIE SNAITTGKAV EELPRFPDDP KCRYLCELQD EKSDMSVEEF 240
  241 WDTLTYRQEC SSGKLVGFFT LQLQFYQTRE FIAKDNFGDS GVMIPAKLYR VTYDTLLKHP 300
  301 FGSLSDAQSS TEKFLSNTLS AVQNLKDFHY KRYKLDICGL AKRDDRKNHN HSKPATQANI 360
  361 LQPRKKVKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..267] MSA 1.008957 View MSA. No confident structure predictions are available.
    3 View Details [268..369] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle