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Protein Overview: snf59

General Information:
Name(s) found: snf59 / SPBC26H8.09c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SWI/SNF complex subunit Snf59 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: SWI/SNF complex [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    regulation of gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEEDITLEH SDDLNKEESG ESNRVNIEEP EHHDNSNKES TNLDDLNMLE EPKYHDNSNK  60
   61 ESTNLDDLNM LEEPEHHDNS KKESTNLDDS NMLEEPKHHD NSNKESTNLD DLNMSEEPKH 120
  121 HDSSNKESTN LDNSNMDESE NQKNFKIEEP KPSGDFRNEG PKQCDDSKIE KPELHVNSKI 180
  181 EEPIHRIDSE HNEPEYHTES KNEESEHNTK SIREEPIHHV DSKNEEPVYS KIPEKMGDEF 240
  241 SENSLSKSDS AVKQEGNLLI HPNNSLKDTA PSKCKEPPVD EALSKKEISD DIAQITSVTP 300
  301 ITEKIEDKDK YISEVIDTYG KLADGFEYRA KTFCLEGRGK VLYMLGTECS RLLGFKDSYF 360
  361 MFHKTPSLRK VLTTQSERDQ MVEMGLLASN FRFRQLSIVP ARQMFLAFGA RILMKGTIDP 420
  421 ESHKALIEKN ISWADDEYYH MDVMANGSTR SSSVKLELKS MDNQNSPSPF QGKDILTLAQ 480
  481 GASFYNSKVM RTRNLRKEAR LSYYTKLRGV NRSVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] MSA 4.173996 View MSA. No confident structure predictions are available.
    2 View Details [232..312] deduced N/A No confident structure predictions are available.
    3 View Details [313..431] Pfam 62.958607 No description for PF08624.1 was found. No confident structure predictions are available.
    4 View Details [432..515] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle