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Protein Overview: SPBC3E7.09

General Information:
Name(s) found: SPBC3E7.09 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Sad1-UNC-like C-terminal [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 659 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRRLSAFG NAFLIYFIIF RLCCCSPQTS HWCKYPALCL KSPDTHNENL VCDAYLSVIA  60
   61 TKSEEKEASN PTTWDFTPTN KYQEPSFHTK TSLNGSDTIS SNFLSKYEYS NGTSTSEFID 120
  121 SISPPLVNET STISSSKKLE QNYSVTEVID TNIITSSSVT LPISEDGSST SAAATIDSNI 180
  181 DEKTVAFSEE KRFNFASTDC AAAVIKTNPE AVGSSSILTE NKDKYMLNKC SAENKFVVIE 240
  241 LCEDIYVDTV QIANFEFFSS IFRDFKVSVS GKYPKYESSW MELGTFTALN LRTLQSFHIE 300
  301 NPLIWAKYLK IEFLTHYGSE FYCPVSLLRV YGKTMIEEFE EANEDFLEQK VNDGSAIKAD 360
  361 EIRKPQESPI FVDEEDTDVQ SKPVRKNPSV ELNSTDTLLS STVISKSLST VVIGNETGKS 420
  421 ESYPATSTRS FNDISPSSSS SYSTAQISTF PSNQESIYKN INKRLSTLEE RKKAFDEIVE 480
  481 KILTNYGKHN AKNMNFTQLL HELNSTLQLE ISKLSKSVVK PSLFALQAKL ELLSAENEYF 540
  541 QSQITSLYQE SSFQKRLLML QLTVLIVLTV YMAVSRLPEN LPTTRSSSNN PIEASRPPFS 600
  601 RDEQDISKAN DFRVSASSAV YTVGPELLQR KKRDPNTSIR SIHEREQDKI IHSRSHSVC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] deduced N/A No confident structure predictions are available.
    2 View Details [147..325] FFAS03 1.47 X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958.
    3 View Details [326..576] PSI-BLAST 4.39794 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
    4 View Details [577..659] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0068322171970982 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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