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Protein Overview: sds3

General Information:
Name(s) found: sds3 / SPBC21C3.02c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • Sds3-like family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ISSLink to PubMed article]
    Rpd3L-Expanded complex [IDALink to PubMed article]
    Rpd3S complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [IPILink to PubMed article]
    regulation of transcription, DNA-dependent [ISSLink to PubMed article]
    histone deacetylation [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTENLQSESI PHEILPKEPF DLPMNNLKSS PKNKDSEKRI NNSIAESEQV VDSALSNPET  60
   61 NANEDIIAPQ LPSQNSEIIE KNSPVNKLNS STSLTTHQLA SLPKLEVTDH DNVSEAETVV 120
  121 LNEDEEKETS LVGSVSVTED LGDSSAIGRT ILVNNSVEPQ MENTANITIV SPSLKESDFE 180
  181 SEEKATNDNN GLIETNHNSK LEESSEHEEE EDEESNIERT EDSDHQIPQR GGTLEAPRKG 240
  241 GPRSGVGSRK RKRATVSRKW STNSESKIKR VALETSQEES DREIADRRSA SEQAHEADDE 300
  301 KAIKRKEAFD ALLNIETEFT FLRNRLYGKK LLKLNEHEEM IQNETHERFN ACIDLITERR 360
  361 DDRVRLATEN LMKQLGNIKN VMDYVTKQRK YQLLFDKRRI RQALLTKIAT KCFQLLNKQK 420
  421 SVHDPTYITQ KTMSYRQSAL LQKQRIEYEA AVLCELNSFA GFPTAPIIET ASFDDIRNDL 480
  481 LEMGCLSENQ D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..249] FFAS03 1.37 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
    2 View Details [250..491] MSA 4.15599 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle