YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC691.02c

General Information:
Name(s) found: SPBC691.02c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • RINT1 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    endoplasmic reticulum [ISSLink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: retrograde vesicle-mediated transport, Golgi to ER [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSQQLIDFI DSRTRHPYKS DEVEKFQQEV NELQLPDPNS LPILSEEEKR QAREDAAFRR  60
   61 SSEGLEDAWL DSAIPADPTP IFRDTVELLC VYQSFVKKSA SLDTVANFLD FSTDFSTLST 120
  121 KKDETEIAPD CLHYIAELLF QKKEREVKEK WKNELTEKLK TLFNWPAINP NLKESSKFES 180
  181 FFGFVRSIQS FKDSETGLPL FMQVYITPYV NQFRYHFMSQ KQTNVLSKPE WFFEFLLKVF 240
  241 RSNRSFYMLM RDIKFFPGVP PFFTFINLLN NVAKEKLTHI IKYDDYLVHL VHETLQYSVR 300
  301 LEQHFHYTQD PLIIFLFEQN GTYDKWLGLE TQLSLTKLED IKIASDAWEL ESDQSDDFSS 360
  361 AVPTKMTVRF RDMIETTFSV LQNLPSLDYQ FNFWRSVQLK PMMQYVNWLE AFYESHESSS 420
  421 SIHLPGSLQT DKSKFDIAEV ERMCKLYSNF KLLMDWLDDI EDEDVYIRIG HKMGSENYAA 480
  481 FYQVKPRLST LTNGSFRMIL RAVSQTLRPL LDNYSDLDTW VIKEQLPGAA LLSTSVSAEI 540
  541 VGFQSRLKEI IALLQKLLIG SSQCEAIYQI GTLVESWMIK IVMTHQFSVR GGVQFAMDAM 600
  601 QIVLEFSDYP LLKFERLMST VELLSLESGE NKLIKKLIIE INQKNYDFID EFFKTKEITL 660
  661 SYEDALGVLY RRVDAWKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] MSA 1.038993 View MSA. No confident structure predictions are available.
    2 View Details [220..310] deduced N/A No confident structure predictions are available.
    3 View Details [311..678] FFAS03 1.58 No description for 2fji1 was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle