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Protein Overview: SPBC16C6.12c

General Information:
Name(s) found: SPBC16C6.12c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • Las1-like protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 470 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    Biological Process: regulation of actin cytoskeleton organization [ISSLink to PubMed article]
    cell morphogenesis [ISSLink to PubMed article]
    establishment of cell polarity [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMKVVPWRL KEDFLYLMSC FYNEGQEGIP DLAALFRGVE IIQAWSTRGR IPHSVESTSQ  60
   61 LVSSLISNDR SQKLALAVSI SRFVSGLLDP IQQSQYAIPM AVLAKSIDLP TYFVELRHAI 120
  121 THEELPSLPV LRQAAQRALS WLYDHYWNPA ATAESEDTYD YTETNELHKF EIKRKVKDLL 180
  181 KQWRSWRKVN VSANMFLPVE EHDYIQQFEA LVQELVTTAN LRLPYIPASF VDDEKDLDFA 240
  241 IETTNLDIVV SCFLEKRVLI PSRTMPISFF PKLKNVWLPL LQSIASKHSF FLPALFTTLW 300
  301 SEILEISQTV DSLVFLDLKE KEELTDKESA GCYLAKWYAY LMREAYTGQP WTSTLSVTQT 360
  361 DLASVLEICL QRSDPFTKII IDELSILDKE LENKFSPLFQ YRSDMFDSRI LDEQEFEDIT 420
  421 LEQMKTELNK FSVRLNNIEA QADSSTMEFQ GHVWYKPSVE PSPIGQIIES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] Pfam 89.585027 No description for PF04031.2 was found. No confident structure predictions are available.
    2 View Details [162..323] deduced N/A No confident structure predictions are available.
    3 View Details [324..470] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle