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Protein Overview: amo1

General Information:
Name(s) found: amo1 / SPBC15D4.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • nuclear rim protein Amo1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear membrane [IDALink to PubMed article]
    [NOT]spindle pole body [IDALink to PubMed article]
    [NOT]nuclear pore [IDALink to PubMed article]
    Biological Process: establishment of nucleus localization [IMPLink to PubMed article]
    establishment or maintenance of cell polarity [IGILink to PubMed article]
    cytoplasmic microtubule organization [IMPLink to PubMed article]
    establishment or maintenance of microtubule cytoskeleton polarity [IMPLink to PubMed article]
    negative regulation of microtubule polymerization [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVCKYFLQN RCRYGTNCKN QHTVPSNGQN AFSKVNVFRP ENGRPPIWVQ RRLKRSDLDN  60
   61 LLPNRRMKDI NDDLKNAKPQ WPFTGYSVVE NLPSIYEGDV SPEELRWWAY QAKATNNMQA 120
  121 YEQRQKQLMD DVEAKAAAVK RSPAAAFDEM RNKLVGKTNY KSIFDKSTSN STVTSNQFNK 180
  181 PTQNSPFNSF SNNNNSFNNN QQANDIFGAP TTSAFTSQLN ASPFSQNTSS NSFTGSNPVQ 240
  241 NNPSSFGSSS FGSATSGPSA FGGISQPNSS FVNSGQGIPN SSFSSFSQVA SGFSQSQNVN 300
  301 DPSSIFGPTV ASGFGIQNQP QQSAFQNLNT QFSLPNNSQP VFGHTSLTQP VNPNGFTVQP 360
  361 PATFMQQPQG PFVPPNTTFE SPFANVTSKI SASGFSNDNP ANKNIIQTPM FGSSNTIDGP 420
  421 INPIGASSIQ TLDDQVEMSN SNQNLAFPPE MIQQFEAQDF IPGKVPTTAP PPQFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..264] MSA 4.215997 View MSA. No confident structure predictions are available.
    3 View Details [265..475] MSA 4.218996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle