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Protein Overview: SPCC4B3.07

General Information:
Name(s) found: SPCC4B3.07 [Sanger Pombe]
Description(s) found:
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  • gi|6434015|emb|CAB60681.1| nuclear pore associated protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|48475019|sp|Q9USJ7.1|YJ27_SCHPO RecName: Full=Uncharacterized protein C4B3.07 [NCBI NR]
  • gi|19075583|ref|NP_588083.1| nuclear pore associated protein [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • pir||T50441 hypothetical protein SPCC4B3.07 [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • nuclear pore associated protein [Sanger Pombe]
  • Uncharacterized protein C4B3.07 OS=Schizosaccharomyces pombe GN=SPCC4B3.07 PE=2 SV=1 [Swiss-Prot]
  • SIMILAR TO S. CEREVISIAE YOR051C WHICH PURIFIES AS PART OF THE NUCLEAR PORE COMPLEX: Q9USJ7; [pompepVF.fasta]
  • YEAST HOMOLOG YOR051C PURIFIES AS PART OF THE NUCLEAR PORE COMPLEX: Q9USJ7; [pompepV13]
  • Hypothetical protein [pompep4896]
  • |||similar to S. cerevisiae YOR051C [pompepnew.fasta]
  • Protein C4B3.07 in chromosome III [4896.FASTAC]
  • |||similar to S. cerevisiae YOR051C|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|6434015|emb|CAB60681.1| SPCC4B3.07 [Schizosaccharomyces pombe]gi|48475019|sp|Q9USJ7|YJ27_SCHPO Protein C4B3.07 in chromosome IIIgi|11359170|pir||T50441 hypothetical protein SPCC4B3.07 [imported] - fiss [nrdb_11152004_Chlamydomonas]
  • |||coiled-coil|Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • (Q9USJ7) Hypothetical protein [pompep4896_normal_reversed]
  • |nro1||nuclear pore complex associated protein|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC4B3.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC4B3.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |nro1||nuclear pore associated protein|Schizosaccharomyces pombe|chr 3|||Manual [spombe-190209-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [TASLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [TASLink to PubMed article]
    positive regulation of transcription, DNA-dependent [IGILink to PubMed article]
    positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway [IGILink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRRPQGLR AAASLKKQQQ LEKQKQEASY ELSGNSSPSK ENGSENVDNG EMEDETMLVY  60
   61 TEEDNISQLW GLYEMSREKL ENDDIDASVS LVFGTIHEAD RILRNTEDIS TLPKDFHAAY 120
  121 SSALLAVSEL FEIAQKRLKE TNTEESYIDA AIERAQLGLD APGNESRLFL ALARAYLEKV 180
  181 RVLVWRHDNE ESLANIPVTQ LVNPYIEKAI QYLRPLAQDS TEYFDALTPD SLRPLYILSS 240
  241 YLFQFGDQFS EAFLLDVCSI ITALWLKSVV DPNTPAYYKL IAQEAVLNNY TTFAEYYMDL 300
  301 LDNSESNVDD LINKASSWLN NSVDTWNVIY TLDKSPERLL KLADIKMDLA QIVQDEASQD 360
  361 NYLKEACNAI KEAQGSGVEL SPDYVEFVEA YSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] deduced N/A No confident structure predictions are available.
    2 View Details [163..393] MSA 2.009923 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle