YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC4B3.07

General Information:
Name(s) found: SPCC4B3.07 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • nuclear pore associated protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed articleLink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [TASLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [TASLink to PubMed article]
    positive regulation of transcription, DNA-dependent [IGILink to PubMed article]
    positive regulation of transcription via sterol regulatory element binding involved in ER-nuclear sterol response pathway [IGILink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGRRPQGLR AAASLKKQQQ LEKQKQEASY ELSGNSSPSK ENGSENVDNG EMEDETMLVY  60
   61 TEEDNISQLW GLYEMSREKL ENDDIDASVS LVFGTIHEAD RILRNTEDIS TLPKDFHAAY 120
  121 SSALLAVSEL FEIAQKRLKE TNTEESYIDA AIERAQLGLD APGNESRLFL ALARAYLEKV 180
  181 RVLVWRHDNE ESLANIPVTQ LVNPYIEKAI QYLRPLAQDS TEYFDALTPD SLRPLYILSS 240
  241 YLFQFGDQFS EAFLLDVCSI ITALWLKSVV DPNTPAYYKL IAQEAVLNNY TTFAEYYMDL 300
  301 LDNSESNVDD LINKASSWLN NSVDTWNVIY TLDKSPERLL KLADIKMDLA QIVQDEASQD 360
  361 NYLKEACNAI KEAQGSGVEL SPDYVEFVEA YSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] deduced N/A No confident structure predictions are available.
    2 View Details [163..393] MSA 2.009923 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle