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Protein Overview: SPBC1289.10c

General Information:
Name(s) found: SPBC1289.10c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • transcription factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: positive regulation of cell-substrate adhesion [IMPLink to PubMed article]
    positive regulation of gene-specific transcription from RNA polymerase II promoter [ISS]
    gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: transcription factor activity [IC]
    specific RNA polymerase II transcription factor activity [ISSLink to PubMed article]
    single-stranded DNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADPGLRSGV GLPSQQGQKH DLQKDQKQPH VNNADRTTQS LLNSYIYDYL IKKDYCEAAR  60
   61 AFGREAQVQT LVRSQEETNS LAKRHKRMSP VAVKHEGISN NESSDENMNV NNGNLDSFSS 120
  121 SSAPPPPPIL PIDSAGGFLI EWWNVFWDIY NARRGQGSEP AKAYMSHISN LRKKSRLNLQ 180
  181 EIQKNSLHTG NTSHPYANAS FPHDPANAMG QQIDSSQFHQ GAGGLNDRNQ HLMRQAMLNN 240
  241 QSRETFPPTA AQLQQLKQLH YRQLQSVQQQ QKQHQQKKTP QSGSTPQMQN TTSQPTTHDT 300
  301 HPPKQQGPIS DFRSIPSSPK TEGAPSNAQF RPSLPATPNG SVPQSNPLYD TTGLNGGQYP 360
  361 VVQNSAQPLL HEINFASNRN PHLKQGGAVP SSTLPQQQKS LDKPKPAQQP STGQFSGNQM 420
  421 NQYGFSNSPY SQNMLYNFNG NANPSRLNPA LKNYMEELKL LEQQNKKRLL LVSQEKERKG 480
  481 YTSASPDRPL SQTITESSVA KTKSTTPKST DTPTEATTSP VKVSTKNSNT TENLNGINES 540
  541 NMPMLQNGLP LRTSGDHPSN YSNLIENSST SDTNNADNGM DVMGNWQLQQ THSSRPTPNA 600
  601 SSPLDVRSKQ KPSSANSNAP TPAPTVNTTN PESSTNEATS VGPALEPSQG ANVHKSDSEL 660
  661 DNQNQSGKSN PDTSATPSAP TESTTVATKS SDNQLLDVGN STDIDAALLN DFDFDKFLKD 720
  721 TSTGDDLWFG LFNLPDNEDS TAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] deduced N/A No confident structure predictions are available.
    2 View Details [193..280] deduced N/A No confident structure predictions are available.
    3 View Details [281..503] deduced N/A No confident structure predictions are available.
    4 View Details [504..661] deduced N/A No confident structure predictions are available.
    5 View Details [662..743] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle