YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC794.08

General Information:
Name(s) found: SPCC794.08 [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • pir||T41616 hypothetical protein SPCC794.08 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582245|sp|O59817|EFR3_SCHPO Protein efr3 [NCBI NR]
  • gi|3150121|emb|CAA19135.1| HEAT repeat protein, unknown biological role [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075256|ref|NP_587756.1| HEAT repeat protein, unknown biological role [Schizosaccharomyces pombe] [NCBI NR]
  • HEAT repeat protein, unknown biological role [Sanger Pombe]
  • Protein efr3 OS=Schizosaccharomyces pombe GN=efr3 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE EFR3; SIMILAR TO DROSOPHILA CMP44E, CONSERVED, UBIQUITOUS MEMBRANE PROTEIN REQUIIRED FOR CELL VIABILITY: O59817; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE EFR3; SIMILARITY TO DROSOPHILA CMP44E, CONSERVED, UBIQUITOUS MEMBRANE PROTEIN REQUIIRED FOR CELL VIABILITY: O59817; [pompepV13]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPCC794.08 protein [4896.FASTAC]
  • |||hypothetical protein|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3150121|emb|CAA19135.1| SPCC794.08 [Schizosaccharomyces pombe]gi|7491992|pir||T41616 hypothetical protein SPCC794.08 - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O59817) Hypothetical protein [pompep4896_normal_reversed]
  • |||HEAT repeat protein, unknown biological role|Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC794.08 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC794.08 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |||HEAT repeat protein, involved in localization to plasma membrane |Schizosaccharomyces pombe|chr 3|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Protein efr3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=efr3 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 798 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [ISSLink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWLLFRSKHK KLVLRCFPSG KLGETEPNGS PLAYLSYYAA SNSSKLRKVA HFLGSRVRHS  60
   61 YYHKRDNEVI IGLKICKTLV QKCRDNINVM ASEVVNMLLV ASSSKNLEVL SACVDCFATF 120
  121 CDNSGKGSPA TFGNEFHSAF NNLVNSFFEL SKGIDCVDPQ QSKMLGLKAF HALTACKFAG 180
  181 TEGGMRYQPH FAIHCVLINS WSESDQEKKS FIDLVRSTAK SYKPLPPSST GVSLPEHDEA 240
  241 GDNIDVAIKK LCIRILFNIY TQTDPLFMAE STKSLIHFFA AKSDTPVNLE YISVVLNQIL 300
  301 DWTPVELRHS IFFCCLRCLS SSRIVNSETN VMVPYMIYSI LNSKNSISGL SVIDVLRDLG 360
  361 SHLINAVNSF DADDQTWYNM CESPSEKLPR RLYLLLVCIT CLTKHQYYDE EFADVWREID 420
  421 TLANSETSSA IQMVALTAFH KLQNEKLNTK KESSAPLSLV TDFLLHSWPK SAERLHTSQS 480
  481 PFVRIKTAEV FYEFLCFLRP SLINFDTILR KSAITSFSVL WDFIYETSWH IERWLKVFSV 540
  541 QSEFYILKLI IQRLYQLYGP VSVTAVLPAM YRGLRPFEND PPRCIAEAVT AYYIIYIGEN 600
  601 LKITTLQSSG RKWLDSLSSS LPSSLLNRGS STHSWEKLTN ASTEEVMLPL DMVVNELLEK 660
  661 SPKVFPEDSR LLFAEQSRHP KYTDIIQKLK KPSREKSFTS SSEYSLPFIS PASDYQQNPL 720
  721 LHATKSLVSI HQQSQRGEMV STLKQALSRP HTASTVVRSP SEINLTRQTS NRVPLLDMLN 780
  781 LNRAMSPTPI QSPPYVRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] MSA 2.047978 View MSA. Confident ab initio structure predictions are available.
    2 View Details [104..262] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [263..428] MSA 1.047983 View MSA. No confident structure predictions are available.
    4 View Details [429..495] MSA 3.036996 View MSA. No confident structure predictions are available.
    5 View Details [496..701] deduced N/A No confident structure predictions are available.
    6 View Details [702..798] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle